Amaranthus tricolor (tampala): 130823889
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Entry
130823889 CDS
T09367
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130823889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130823889
Membrane trafficking [BR:
atri04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
130823889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
130823889
NCBI-ProteinID:
XP_057544698
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All DBs
Position
9:complement(12131449..12151084)
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AA seq
789 aa
AA seq
DB search
MISDGIDDEEKWLSSGIAGLQQNAFYMHRALDSNNVKDALKYSAQMLSELRTSKLSPHKY
YALYMRAFDELRKLELFFHEETRRGCSIIELYELVQHAGNILPRLYLLCTVGCVYIKSKE
APAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSKDKLPDIGSEYEGDADTVADAVEFVL
QNFTEMNKLWVRMQYQGPAREKERREKERSELRDLVGKNLHVLSQIEGVDLDMYKDTVLP
RVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDTLLGACPQLQPSVDIKSVLSSLME
RLSNYAATSPEVLPDFLQVDAFSKLNTAIGKIIEAQADMPILAVVTLYSSLLTFTLHVHP
DRFDYADQVLGSCVKKLSIVGKLDDSKAAKQIVALLSAPLDKYNDVITALKLSNYPCVME
YLDYETNKVMAKIIIQSIMKNETHICTGDKVEALFELIKGLIEGTNGTVPDEDEEDFKEE
QNAVARLIQMLHNDDPEEMFKIIDVVRKHILTGGVKRLSFTVPPLVFSSLKLIRRLQNQD
AENPGDETEGTPKKIFQLLNQLIEALANVPAPELALRLYLQCAEAANDSDLEPVACEFFT
QAYILYEEEISDSREQVTALYLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCR
AVYACSHLFWADDQDGARDGERVLLCLKRALKIANAAQQMANATRGCGGSVMLFIEILNK
YLYFFEKGNNQITVNTIQDLMELITTEMQNENATNDPAAEAFFASTLRYIQFQKQKGGAV
SEKYEPVKA
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgacggcattgatgatgaagagaaatggctttcctccggcatcgccggtctt
caacagaacgccttctacatgcatcgtgctctggattccaacaatgtcaaggatgcctta
aagtactcggctcagatgctctccgagctccgtacttccaaactctcccctcataagtat
tatgctctttatatgcgagcatttgatgagttgagaaaattggagctcttctttcatgaa
gaaaccagacgaggttgttccatcattgaactctatgagcttgtacaacatgctggcaat
atcttacctcgactatatcttctatgcactgtaggatgtgtatatattaaatcaaaggaa
gctcctgcaaaagatattctcaaggatttagtagaaatgtgtcgtggcatccaacatcct
ctgcgagggctgtttttgaggagttacctttctcaagttagtaaggataaattacctgat
attggctctgaatatgaaggagatgctgatacggtcgcagatgctgttgaatttgtgttg
caaaattttactgaaatgaataaactttgggtgcggatgcaataccagggacctgcacgg
gagaaggagagaagggaaaaggagaggagcgaacttcgtgatcttgttgggaagaatctg
catgtattaagtcaaattgaaggagttgatcttgacatgtacaaggatacagttcttcct
agagtccttgaacaggtcgtcaattgtaaggatgaactcgctcaattttatttgatggac
tgcataattcaagtatttcctgatgagtaccacttacaaacacttgacacgttgctgggt
gcttgtcctcagctccagccatcagttgatatcaaatcagtcctctccagcttgatggaa
aggctttcaaattatgctgctacaagtccagaggtattgcctgatttcttacaagtggac
gccttctcgaaattaaacactgctattgggaagatcatagaagcacaagcagatatgcct
attcttgctgttgtaacattgtattcatcccttcttaccttcacattgcacgtccatcca
gatcgatttgattatgcggatcaagtattgggatcatgtgttaagaagctctctattgtt
gggaaacttgatgacagcaaggcagcaaagcaaattgttgcacttctaagtgccccactg
gataagtataatgatgttatcactgctttgaagttatctaattatccttgtgtgatggag
taccttgactatgagacaaataaagtgatggcaaagataatcattcaaagtattatgaaa
aacgagactcatatatgtactggtgataaggttgaggcattgtttgaattaataaaaggg
cttatcgagggcacaaatggcactgttcctgatgaggacgaagaagacttcaaggaagag
cagaatgctgtagcacgcctcatacaaatgctgcacaatgatgatccagaagagatgttt
aagattatagatgtagtgcggaagcatatattgacgggtggagtgaagcgtctatcattt
actgttccaccccttgttttttcctctctaaagttgattaggaggctccagaaccaagat
gcagaaaaccccggagatgaaacagagggaacgccaaagaaaatttttcagctattgaat
cagctgattgaggcccttgcaaatgttccagctccggagcttgcgctacggctgtatctg
caatgtgctgaggctgccaatgactctgatctggaacctgtcgcctgtgaattcttcact
caagcatatatattatatgaggaagaaatttcggattcaagagaacaggtcactgcgtta
tacctaataataggtacccttcaaaggatgcatgtatttggtgttgagaacagggatacg
ctgacccacaaagcaacagggtattcagcaaagcttttaaagaaacctgatcaatgtaga
gctgtttatgcatgctctcatcttttttgggcagatgatcaggacggtgcaagagacgga
gagagggttctactttgcttgaagagggctctaaaaattgcaaatgccgctcaacagatg
gctaatgctacacgtggttgtggtggatcagtaatgcttttcattgaaatcctcaataag
tacctttattttttcgagaaagggaacaaccagatcactgtcaatacaatccaggatttg
atggaattaattaccacagagatgcaaaacgaaaatgctacgaatgatcctgcagctgaa
gctttctttgcaagcactttgcggtacattcaattccaaaaacaaaaaggaggtgccgtg
agcgagaaatatgagcctgtaaaagcatga
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