KEGG   Amaranthus tricolor (tampala): 130824011
Entry
130824011         CDS       T09367                                 
Name
(RefSeq) cyclin-T1-3-like
  KO
K15188  cyclin T
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    130824011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atri03021]
    130824011
Transcription machinery [BR:atri03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     130824011
    Brd4/P-TEFb complex
     130824011
    7SK RNP complex
     130824011
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C TFIIB RE_TaqI Cyclin_C_2
Other DBs
NCBI-GeneID: 130824011
NCBI-ProteinID: XP_057544857
LinkDB
Position
9:28463322..28468041
AA seq 605 aa
MASLLSGDSSYVGPSEVVSRRISQEKPEDGGRWYFYRKEIEENSPSRRDCIDLKKETYLR
KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFYLRQSHAKNDRRTIATACMFLAGKVEETP
RPLKDVILVSYDIMNKKDPVAVQKIKQKEVYEQQKELILLGERVVLATLGFDLNVQHPYK
PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFEPHHIAAGAIFLAAKFLKVKLPSD
GEKVWWQEFDVTPRQLEEVSNQMLELYEQNRAPQNQASEAEGSIAGGATNRPMTRNSTEE
QLPTSSISQAEVSIKAGTSKPPNTHQLSDHSNKPSGPSTGSHNRSNDYGNSDHKLHGESR
AVEPSVYRENFMEGQNTKTGSEWNSSEDIKENNNGGNRARERDLKDKYHINNVESKEAGK
AQSPSEMIEKIDTNKLKELREKRRKSRGDVLRKKDLMDEYDPIVKELEEGVELAAAESEK
IKQEKKQNWTQPSTRLDSDSSHNIKPLETPGDRHHLGSKNLKYHGLDVENVEEGEVSTID
DSNWDYESPKSNDRKRKGGSSPDKTSDGKRWRDSMPGDFPEEKRRIGHLGYPDRDHKRHV
PENHT
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggccagtttactttctggagattcctcgtatgtcggaccttctgaagtggtttcgcgt
agaatttcccaagagaagcctgaggatggtggccggtggtacttttataggaaagaaatt
gaagagaattctccatctaggcgtgattgtattgatttgaaaaaggaaacctacctgcgc
aaatcatactgcacttttctacaagatttagggatgagactcaaagtacctcaggtgaca
attgcaacagctattattttttgccaccggttttatctccgtcagtcccatgcgaagaat
gatagaaggacgatagcgacagcttgtatgtttcttgctgggaaggttgaagaaacccca
cgcccattgaaggatgtcatccttgtttcctatgacatcatgaataaaaaggatcctgtg
gctgtccagaagattaagcaaaaagaggtatatgaacaacaaaaagagctaattctactg
ggggaaagggttgtacttgcaactcttggttttgatcttaacgtgcaacatccatataaa
cctcttgttgaggctataaagaaattcaaggttgcacagaatgctcttgcccaggttgca
tggaattttgtcaatgatgggctgcggacatctctttgtttgcaatttgagccccatcac
atagcagcaggtgccatcttccttgctgccaagttccttaaagttaaacttccttcagat
ggagagaaggtctggtggcaagagtttgatgtcaccccacgtcaattggaggaagtcagc
aatcagatgttggaattgtatgaacagaacagagcaccacaaaaccaagctagtgaggct
gagggaagcatagccggaggtgctacaaatcgaccaatgacaagaaattcaactgaagag
caattaccaactagcagtatttctcaagctgaagtttccataaaagcaggaacctcgaag
cctcctaacactcatcagttgtctgatcattcaaataaaccctctggaccctctacaggc
tcccataatcggagtaatgactatggaaattcagatcacaagctccatggagaatcaagg
gctgtggagccctctgtgtaccgggagaactttatggagggtcaaaatacgaaaactggc
tctgagtggaacagtagtgaggatatcaaagaaaacaacaatgggggaaatagggcaaga
gaaagagatttgaaagataaataccacatcaataacgtagaatctaaagaagctggaaaa
gctcagtcgccatccgaaatgattgagaaaatagatacaaacaaattgaaggaattgcgt
gaaaagagaaggaagtcccggggagatgtgcttcgcaagaaagacttgatggatgagtat
gatcccattgtgaaggagctagaagaaggggttgagttggcagctgctgagagcgagaaa
ataaaacaggaaaagaagcagaattggactcagccctccacccgactagatagtgatagt
tcacataatattaaacctcttgagacacccggagaccggcatcatttgggctcaaagaac
ctgaagtatcatggacttgatgttgagaatgtagaagaaggtgaagtgtctacaatagat
gattctaactgggattatgaatcaccaaaatccaatgataggaagagaaagggtgggagc
tcaccagacaaaacaagtgatggaaagagatggcgtgatagtatgccaggggattttcct
gaagagaaaaggaggattggccaccttggttatcctgatagggatcataaaagacatgtt
ccggaaaaccatacctga

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