Amaranthus tricolor (tampala): 130824041
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Entry
130824041 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130824041 isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atri03009
]
130824041
Ribosome biogenesis [BR:
atri03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130824041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
130824041
NCBI-ProteinID:
XP_057544903
LinkDB
All DBs
Position
1:complement(45364897..45397454)
Genome browser
AA seq
2680 aa
AA seq
DB search
MATSREAMSVKSLNTTPGRRNRRFVFKSFAQRIEELEIDVFRCLDTIKPEPSSGSSFFLD
CLIQWRELNTAEDFISFYLEMFPLVQTLPLVLLNKDAIISKLLSRLHLKARLSLEPILRL
IAELSRDLLEDFLPFLPKIIDSYLTLLKEGSDREPDIVEQLFTSWSYIVMYLQKYLTQDV
VNVLKVTVKLRYYPKDFVQEFMAEALSFLLRNASTEQLIKGVRKILREAARKPSQAKKTG
VAALLWHIMRGTSSKFHSRADRMLHLLIDNSTLSIGDKFDQGSDTVIEIVITAFERCMEL
NPNDLKLIWDCLYKEINGCVTGEYSQHLSRLLSVLILIISADRGRKVSDFEPILELVGLL
MRQFVLPYISGKAEGLVSEAADKIFQLMLCVTDGIYSNKNLTALPKISLQWAPIFQLRNS
SLLTFLKEFVLKDYAILAFRSNILSGCLNVLGISKGDALHLMLTFSERFRDKTGSFNVLE
GMSEDVVFMARHFFQETIINWIELLKSITHGDKSFIQVDEGNLALLWGNICCVPYFLYAE
RNGFLMDLVDVVDQLLIAEADFAGVPEPIWQGLVGAALQSYHNAGKTESFELEDTRRILD
IGKRYKSSRKIVSAVADYLDLSYGSNIQTKSNAVIKHSKLESDSINVLNVYSENLYSPEK
ELRVSTLRVLCHLEHLNYVSLRSKKVDEQLMDVVVSEENQTGTCYCNVFELLLSIEETPI
SVATSRKLTLLVSRIQTSLSAPGTPEVYILPAFYGIIGLLFNQFKDLSNSCLECLSALIK
TYPALLWDRFISFFEQQQASFLKRQVSDNSNMALSCETTDLLERFRMFCGLSSCDNNCSS
ILSMLLQALEKMPSVTESHSRQIVPLFLKYLGYKDENSCLGSYDSLTCMGKHWRIMLMEW
LNVLKLMKNSRSLYHSQLLKDVLVYRLLDDNDAEMQTKVLDCLLNWKDGFLLPYEKHLKN
LVNSKYLREELATWNLSEESNFVQGEHRAQLVPLVLRLLMPKVRSLKTLASRKHASVSNR
KAVLGFIAQLSVSELPLFFKLLMKSLQFTELDNGGTEGSDESSVDEFESSSLLSLFTTEK
ILAIPWKKRHGFLHVVEEVLNIFDVSRASPFLDLLMGCVVRILEVCASNILSRSNKQLAH
PYDCSEITLPDSGEEAVSHDVCINVKQSKDVRSLCLTIISSALKKYEDHDFGSKFWDIFF
KAVKPLVDGFKQEGSSSERPSSLFVCFLAMSQSPTLVSHLCREKNLIPDIFSFLSVPTAS
DAIVDSVFKFIANLLSLEPELGIYENTVKKVLLSNLEGLVNNLHHLFHNNTERKRKLLKN
PGETVLRVLKMVSKIIKDQTVARKFADVLLALSSDGIKNSDVCMEALQIFRDIVPALQSE
VSNKIFNAISPMLISAERNLRLSICELFDALAENDSSIRSTAKLVSELNAISALEMGDLD
FDAIINAYDRITPDYFFGVGEDQAIVILSHCIYDIKSEELILRQSAYKSLLSFVNFSAMI
IEGEKMVLNGSYWNNSRVQHIVNKFLLKHMGDAMSKGTSMRKEWIDLLHEMVLKLTGIPN
LGTLKVLCSQDAEVDFFNNIVHLQKHMRARALSRFRNLVGNGQLSELMLKRVFIPFFFGM
LYDLQTGKGEHLKIACMDTIASISGQLGWKSYYELLMRCFRDMAKKPDREKILLRLVCSI
LDHFHFSETFSSQDSGHAHNDVIENEPKEKPDSVVITRHTTSSLSTIQACLDGMVLPKLQ
KLLVSDPEKVNIIINVAILKVLQLLPGDTRDAHLSSIIHRIANFLKNRLQSVRDEARLAL
VACLKELGFEYLQLVIKVLRATLKRGFELHVLGYTLNFILSKGLPDSVGGVLDYCLDELL
TVVDNDIFGEVAEQKEVEKIAFKMKETRKQMSLNTLTLIAQNVTFKTHGLKVLSPVTAHM
QKHLTPNLKLKLETMLTHIAEGIERNLSVDQTDIFIIIYSLIDDWLSDDNLRRETLLVEG
SDKDILREASNKMSLKFYVGTEPQCSYLITVFALQLLHKRMKKIKFDTQVLSMLDPFIKL
LVSCLKSKYEEIIAVALKCIFLLIRLPLPSLESQADMIKVTILDIAQSSSNANSHVMHSC
LKLLTALLQSTKITLSSDQLHVLIQFPLFVDLEKNPTFVALTLLKAIVRRKLVVHEIYDL
VLQVAEMMVTSQEEAIRKKCSKILLQFLLHYQLSQKRRQQHLDFLVAYLRYEHATGRVAV
LDMLETVIKRFPVSIINEQAETFFVHLVLALANDHDNHVRYLIGIVLKHLIDRISPQTLE
SILSICLTWYLGENQQLRSPAAQVLGFVVEVTKRGFQKHIKEVLPVMKMIVQSTFDVLNG
GQLNLLDQDTIPLWKDAYYSFILLEKILTQFPDLFFSMDTEDIWQAVSDFLVHPHPWIGN
ICNRLVALYFEQMGKQGKKLGTTCLTSTSRMFLIASSLCYRLKVQLADKVARRLVKCNLA
FAICGIQNLLRQKEFEDPCMFWSTLDPQEQGCFLKACQLLDPKSGKSISTLFTCGVDCEN
FDLKNNGLSVLLVSGILITMGKTALQTQDTQTKMILGSFKLIAERTGQEDCQQFANILLL
PIYKLCEGFSGKEVSDDVKQRAEKVRKTIQVKIGTQNFVQAYNQLRHDLGEKRFKRKRDD
KLMAVTDPIRNAKRKMRISAKHQAHKKRKMMAMKMNRWMR
NT seq
8043 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccagggaagccatgtcagtaaagtctctcaatactactccaggccgccga
aatcgccgttttgtgttcaaatcatttgcacaaagaattgaagagttagaaatcgacgtc
ttccgatgtttggatactattaaacccgagccttcttctggctcctcttttttcctggat
tgtttgattcaatggagggagttgaatacggccgaggattttatatcattctatctagaa
atgtttccgcttgttcaaactttgcctttggtgctgttaaacaaggatgcaattatttca
aaactgctctctaggttgcatttgaaagcgcggctttcattagagcctattctcaggttg
attgcggaattatcaagagatctactcgaagactttttaccctttcttccaaagattatt
gattcttatttgactcttctcaaagaaggctctgaccgggaaccagatattgttgaacag
ttatttacctcatggtcatatatagtgatgtatctacagaagtatctcactcaagacgtt
gttaatgttctcaaggtcacagtcaaattgagatattatcccaaagattttgtccaggag
tttatggctgaagctctttcatttttgctgagaaatgcatctactgagcaacttataaaa
ggtgttcggaagattctacgtgaagctgcacggaaaccatctcaggctaagaaaactgga
gttgcagctctgctttggcatattatgagaggaacatcgtccaagtttcattcacgtgca
gatcgaatgttgcatttattgatagataatagcactttgagtataggtgacaagtttgac
caaggatctgacactgttattgaaattgtgattactgcttttgaaagatgtatggagttg
aatcccaatgatctgaagctgatttgggattgcttgtataaggaaattaatggttgtgtt
actggtgaatattctcaacatttatctcgtctgttatcagtgcttatattgattatctct
gctgatcgcggtcggaaagttagtgatttcgagcctatattggaattagttgggttgctc
atgcgacaatttgttctaccgtatattagtggtaaagcagaggggctggtatctgaagct
gctgataaaatctttcagctcatgctgtgtgttactgatggcatttatagtaataaaaat
ttgactgctcttcccaaaatttcccttcagtgggctcctatatttcaattaaggaactca
agtttgcttacatttctgaaagagtttgtcttgaaggattatgctatacttgcattccga
agtaatattctaagtggttgcttgaatgttttgggtatatcaaagggagatgctctacat
ttgatgttgacattttctgaaaggtttcgggacaaaacaggaagtttcaatgtactggaa
ggaatgtccgaggatgtggttttcatggcccgtcatttctttcaggagactatcatcaat
tggattgaattgttaaagagtataacacatggggataagtcatttattcaagtagatgaa
ggcaatttggctttactatgggggaacatctgttgcgtaccctatttcctatatgctgag
aggaatggttttttgatggacttagtggatgtagttgatcagttattgatagctgaagca
gattttgccggagttcctgaaccaatctggcagggcctagttggtgctgctttacagagt
taccacaatgctggaaaaactgaaagttttgaacttgaagataccaggaggattttggat
attggaaaaaggtacaaatcgtcacgaaaaatagtgtcagctgtagcagattacttggat
ttaagttatgggtccaacattcaaactaagagcaatgctgttataaaacattccaagctt
gaatccgattcgataaatgttttgaatgtgtattcagagaacctttacagtcctgaaaag
gaacttcgtgtttcaaccctcagagtactgtgtcatttggaacatttgaactacgtatcg
ttgaggtcaaagaaggtggatgagcagttgatggatgtagtagtttctgaagaaaatcag
accggcacctgttattgcaatgtgtttgaactactactctcaattgaggaaacacccatt
tcagtggctaccagtagaaaactcactttgctagtctctagaatacaaacgtctctctct
gctccagggacacctgaagtatatatactgcctgctttttatggcattattgggcttttg
ttcaaccaattcaaggatttatcaaattcatgtttagagtgcctttctgctttgatcaag
acctatcctgcgctgctttgggatagatttatcagtttttttgagcaacagcaggccagt
ttcttaaagaggcaggtgtcagacaactcaaacatggcattatcctgcgagaccactgat
ttgctagaacgctttcgcatgttttgtggcttatcatcatgtgacaataattgctcatcg
atattgtcgatgcttctccaagctttggagaagatgccaagtgttaccgaatctcattct
cgtcaaatagtccctttatttttgaaatatcttggttacaaagatgaaaactcttgtctg
ggatcgtatgactcattgacttgtatgggaaagcattggagaattatgctcatggagtgg
ctaaatgttttaaaattaatgaagaattccagatctttataccatagtcaactattgaaa
gacgttttggtttataggctgcttgatgacaatgatgctgagatgcagacaaaggtgttg
gattgtctcttgaattggaaggatgggtttttgctcccatatgagaagcatttgaagaat
cttgtcaattcaaaatatttgagagaggaacttgctacttggaatctgtctgaagagtct
aattttgtacaaggagagcatagagcccaacttgttcctctggtgttacgattgcttatg
ccgaaagttagaagccttaaaacacttgcttcaaggaagcatgcaagtgtgagcaatcga
aaggctgtgctggggtttatcgctcaacttagtgtttctgagcttcctcttttctttaaa
ctattgatgaagtctttgcaatttactgaacttgataatggtggaacggaaggttctgac
gaaagcagtgtggatgaatttgaatcgtctagtttactgagtcttttcaccacagagaag
atattggcaattccctggaaaaagaggcatggctttcttcatgtggttgaagaagtttta
aacatttttgatgtttcacgtgctagcccatttcttgacctcttaatgggttgtgttgtt
cgaatactggaagtctgtgcttccaatattttgagtagaagtaataagcaacttgctcac
ccttatgattgttctgaaatcaccttgccagacagtggagaggaagctgtgagccatgat
gtgtgtataaatgtcaagcaatccaaagatgtgagatccttatgcttgacaatcatttcc
tctgctcttaaaaagtatgaggaccatgatttcggctctaaattttgggatatattcttt
aaggcagtcaagcctttagttgatggatttaagcaggaaggttcaagtagtgagaggcca
agttctttgtttgtttgctttcttgcaatgagccagagtccgactcttgtatctcactta
tgcagagagaagaacctgattccagacatattttcatttttatccgttccaacagcttcg
gatgctatagttgatagtgttttcaaattcattgcgaaccttctaagtcttgaacctgag
cttgggatttatgaaaacactgtcaagaaagttctactttcaaaccttgagggtcttgtt
aacaatctgcatcaccttttccacaataataccgagagaaaaaggaagttgctcaaaaat
ccaggggaaactgtgctcagagttctcaaaatggtgtcaaagatcataaaagatcaaaca
gtagcaagaaagtttgcggatgtcttgcttgccttatcatctgatggaattaaaaattct
gatgtatgtatggaagctctgcagatcttcagagatattgtgccggcattacagagtgaa
gttagcaataaaatcttcaacgccatatcacccatgcttatttctgctgagaggaacttg
cgcttgtcaatatgtgagctttttgatgcattagctgaaaatgattcatccatacgctct
acggccaaacttgtctctgaattaaatgcaatttctgcattggaaatgggtgaccttgat
tttgatgccatcatcaatgcttatgacagaatcactcccgactacttctttggtgttgga
gaggatcaagcaatagtgatactgtcccattgcatttatgatatcaaatccgaagaatta
atattgaggcagagtgcgtataagtcgttgctctcatttgttaatttctctgctatgata
attgaaggagagaaaatggtacttaatggaagttattggaataatagtcgcgttcagcat
attgttaataaattccttttgaagcacatgggagatgcaatgagcaaaggaacaagcatg
cggaaggaatggattgacttgctgcacgagatggtcctaaagcttacaggaattccaaat
cttggaactttgaaggttttgtgcagtcaagatgctgaggtggactttttcaacaacatt
gttcatttacagaaacatatgagagctagggcattgtcacgctttaggaaccttgttgga
aatgggcagctttctgagttgatgttgaagagagtattcatccctttctttttcggtatg
ttgtatgacttgcaaacgggaaagggagaacatctaaaaattgcctgcatggataccatt
gcttctatatctggtcaattaggatggaaatcatactatgaactactaatgagatgtttc
agggacatggcaaagaagcctgacagggaaaaaatattgttacgtcttgtttgttctatt
cttgaccatttccatttttctgaaaccttttcctcacaagactctggacatgctcacaat
gatgtgattgagaacgagcccaaagaaaaacctgattcagttgtgataaccagacatacc
acttcgagtttgtctacaatacaggcctgccttgatggtatggtgctgccgaagttgcaa
aaattgcttgtatctgatccagagaaagtgaatatcattatcaatgttgctatattgaaa
gttcttcagttacttcctggggatactcgggatgctcacctttccagtatcattcatcga
atagcaaacttcctgaaaaatcgtttgcaaagcgtccgtgatgaagcaagattagctttg
gtagcatgtttgaaggagcttggttttgagtaccttcaacttgtaatcaaggtcttgagg
gcaacactgaaacgagggtttgagcttcatgttctggggtatactctcaactttatcttg
tcaaagggtcttccagattctgttggtggtgttctagactactgtttggatgaactcctt
actgtggtagataatgacatttttggagaggtagccgagcaaaaagaggtggaaaagatt
gctttcaaaatgaaagaaactagaaaacaaatgtctttgaatactcttacattgattgct
caaaatgtcactttcaaaacccatgggctgaaggtactctctccagtaactgctcatatg
cagaagcatttgacaccaaatttaaaattaaagttggagactatgctcactcacattgcc
gagggtattgaaagaaatctatctgttgatcaaactgatatatttattatcatatacagc
ctcattgatgattggctatctgatgataaccttaggcgtgagacattattagtagagggt
tcggacaaagatatattgcgtgaggctagcaataaaatgagtttgaaattttatgttggg
actgaaccccagtgctcgtatcttatcacagtcttcgcgcttcaattacttcacaagcgt
atgaaaaagatcaaatttgacacacaagttctttcaatgctggatcccttcataaagctg
cttgtttcttgtctaaagtccaagtacgaagaaataattgctgttgccctcaaatgtata
tttctgttgataagattgcctcttccttctctggaatctcaagctgacatgataaaagtt
acaatattggacattgctcaaagttcatctaatgctaatagtcatgtgatgcattcctgt
ctaaaactattgacagccctgctccagagcaccaaaattacactttcttctgatcaattg
catgttttgatccagtttcctctttttgttgatcttgaaaagaatcccacttttgttgcc
ttgacacttttaaaggcaatagtacgacgcaagcttgttgtccatgaaatatatgatcta
gtattgcaagttgctgaaatgatggtcaccagtcaagaggaagccattcgcaaaaaatgc
agtaagatattgttacaattcttgctgcactatcaactttctcaaaaacgcaggcagcag
catcttgatttccttgttgcttatttaaggtacgagcatgccactgggagggtggctgtg
ctggacatgcttgaaacagttattaagagatttcctgtgagcataataaatgagcaggca
gaaacattctttgtccatttagtgcttgctttggccaatgatcatgataatcacgttcgc
tacttaataggcattgttttaaagcatcttattgaccgcataagcccacaaacacttgag
tccatccttagtatttgccttacttggtatttgggggagaatcaacagctgcggagccca
gcagcacaggtccttggatttgttgttgaagtgacaaagagaggttttcagaagcatatc
aaagaggtactgcctgtaatgaaaatgattgtgcagtctacctttgatgtattaaatggc
gggcagcttaatcttttagaccaagacacaattccgctttggaaagatgcttattactca
ttcattttgttggaaaaaattcttacacagtttccagacttattcttttctatggataca
gaggatatatggcaagcagtctctgactttcttgtgcatcctcatccatggattggtaac
atatgcaaccgtcttgttgcattatactttgagcagatgggaaagcaggggaaaaaatta
ggaacaacttgccttacaagtacaagtaggatgtttctgatagcttcttctttatgttac
cgattaaaggttcaacttgctgataaagttgcgagaagacttgttaagtgcaatcttgca
tttgcaatatgtgggatacaaaacctattgcgtcaaaaggaattcgaggatccttgtatg
ttttggtccacccttgatccacaagagcaaggatgttttcttaaggcttgtcagttgctt
gatccaaaaagtggcaagagtatttcaacattgtttacctgtggagttgattgtgagaac
tttgatctgaaaaataatggtcttagtgtattgcttgtatctggtatactcatcacgatg
ggaaaaactgctcttcaaactcaggatactcagacaaagatgattcttggcagtttcaag
ctgattgctgagcgaaccggccaggaagactgccaacagtttgccaatatattactgttg
ccaatttacaaactttgtgagggattttctggaaaggaagtttcagacgatgtgaagcaa
cgtgcagaaaaagtacgaaaaacaatacaagtcaagattggtactcagaattttgtacaa
gcgtacaatcagttgaggcatgatcttggagaaaaaaggttcaagaggaagcgagatgat
aagctgatggctgtcactgatcctatcagaaatgcaaagagaaaaatgagaatatctgca
aaacatcaagcccataaaaagaggaaaatgatggcaatgaagatgaatagatggatgcgt
taa
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integrated database retrieval system
