Amaranthus tricolor (tampala): 130824042
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Entry
130824042 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130824042
KO
K14315
nucleoporin NDC1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130824042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130824042
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130824042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
130824042
NCBI-ProteinID:
XP_057544900
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All DBs
Position
9:25445484..25452109
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AA seq
535 aa
AA seq
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MSPPASDILQNRFLSFLIWQSIQSSAIFILFKAFFFSPFSFKHLLPSLFGTFSFFFFLLS
MLLFSISVQILSTPQYRRPASVPELALGIIRLLFSGSASLDSDFVGRVRSSLCIALFVIV
SAASSFVAVISIAGSSYSGSLGGLINDLGFKALATGMIYGVYFVFSRRWVLVFPIVQRPP
FFSYKMGLLPAVRQASKLSVASFLFTPLFVFLLPNQHKSPVAGKFFSGNFIFFIGSFAVF
LFWELILHLHKVLHTKRYVFAPPKGSLAVETSPSDFLLATLEESNPRSLLKYLGYLDLSM
VCGSNVEPWRRAAFFEETGETYKRVVAACLRPLEQFASKLAEGLTCSADHTNKLSHQLSS
PNDIFRSSEILESFSDFQLYAWCAQAVASLEVRSHTEDRFGVAQLSGSHASVLSTLLSCL
LAVETSMGKKINLQSPNHILGPAGIKWATNSTARREITSAINKKRGSPSHSKSYALADVL
KTSIYSIVSEFHEEMLASAKMGLLEKEWLNNGKPVYGSTELLVLKLHFFLNFQAS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccggcttccgacatcctccagaatcgctttctatctttcctaatatggcaa
tcaattcaatcttccgccatttttatactcttcaaagcttttttcttctctcctttctct
ttcaaacacctccttccttctctctttggtaccttctctttcttcttcttcctcctctca
atgcttctgttctccatttctgttcaaatcttatctactccacagtatcgccgccctgct
tcggtccctgagctggctcttggaatcattcgattacttttcagtggttcggcttccctt
gacagtgattttgtcggtcgagttaggtcttcgctttgtattgcactttttgttattgtt
tccgctgcttcaagttttgtggctgtgatttctattgctggaagtagttattctggttct
ttaggtgggttgatcaatgatttggggtttaaggctcttgctactggtatgatttatgga
gtatactttgtattttctcggcgttgggtgttggttttccccattgttcagcgtccacct
ttctttagctataagatggggcttcttcctgctgttcgacaagcgtcaaagctttcagta
gcatccttcttgttcacaccattgtttgtgttcctcttacctaatcaacataaaagtcca
gttgcaggcaaattcttttcgggaaatttcatctttttcattggaagttttgctgttttt
ctcttctgggaattgatacttcatttacataaggtacttcatacaaagagatatgttttt
gctccaccgaaaggatcattggcagtggaaacaagtcccagtgattttcttctggctact
cttgaggaaagtaatccaagatctcttctaaagtatcttggatatcttgatttatccatg
gtttgtggtagtaatgttgaaccctggcgccgggctgccttctttgaagaaactggtgag
acttacaaaagggttgtggctgcatgcttgaggcctttagagcagtttgcttccaagtta
gctgaaggattaacttgttcagctgatcacacaaacaagctttcacatcaattaagttca
ccaaatgacatttttcgcagctctgaaattctcgaatcatttagtgatttccagttgtat
gcttggtgtgcacaagctgttgcatcattagaagtgcgctcacacacggaagacaggttt
ggagttgctcagctatccgggagccacgcttcggtgttatcgacactcttgtcttgtctg
cttgctgttgaaacatccatggggaagaagattaacttgcaatccccgaatcatatcttg
ggtcctgcaggcattaaatgggctacaaacagcacagctaggcgggaaattacttcagcc
ataaacaagaaacggggcagcccttcacactcgaagtcctacgcattagcagacgtgtta
aagacatcgatatattccatagtatcggaatttcatgaagagatgctagctagtgctaaa
atggggcttttagagaaagaatggctgaacaacggtaagcctgtatatggatctacggag
cttctggttctaaaactgcatttctttcttaactttcaagctagctag
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