Amaranthus tricolor (tampala): 130824121
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Entry
130824121 CDS
T09367
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130824121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130824121
03036 Chromosome and associated proteins [BR:
atri03036
]
130824121
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130824121
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130824121
PBAF complex
130824121
GBAF(ncBAF) complex
130824121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Tospo_nucleocap
Motif
Other DBs
NCBI-GeneID:
130824121
NCBI-ProteinID:
XP_057544993
LinkDB
All DBs
Position
9:complement(9605471..9608677)
Genome browser
AA seq
547 aa
AA seq
DB search
MSSNTNNNQNKNIGSSMPMSSPYGNSGMGNPNNLPPNFNPSSSQTQGQNLPHQLGYGFQS
QFQLAQAQALAQAQSKAAAHAHLLQAQGLSLNQAQALGIGNLGGSSSPSISGVGNLGMKR
VPQKPPVHPPGPSGGMNLMSPMKNAMELTPAAMARRKKQKTQEKHLSGRVAPILPESALY
TQLLEFESRVDAALMRKKIDIQESLKNPPSVQKTLRIYVFNTFANQSQSIPKKPNAEPPT
WTLKIIGRILEDGIDPEQVAAMKLNPLHPKFSTFFKRVTIGLDQRLYPENHLIVWENSRS
SAPTEGFEVKRKGDKEFTVNIRFDMNYIPEKFKLSQPLTELLGIEAETRPRIIAAIWHYV
KARKLQNQNDPSFFNCDPQLQKVFGEEKMKFTMVSQKISQHLSPPPPIQVEHHLKLSGSS
PSGNACYDILVDIPFPIQRELSMLLANTEKTKEIEICDEAICAAIRKIHEHRKRRAFFLG
FSQSPSEFINALIESQSRDLKVVSGEASRSVERERRSDFFNQPWVEDAVIRYLTRKPANA
PDGPGST
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaaatacgaacaataatcaaaataagaatattggaagttcaatgccaatgtca
tccccttatgggaattctggaatgggaaaccctaataatttacccccaaatttcaatcca
tcatcatctcaaactcaaggacaaaatctgccccatcaattagggtatgggtttcagagt
cagtttcaactagcccaagcccaagccttggcccaagcacagtcaaaagctgctgctcat
gctcatcttctgcaagctcaaggtttgagtcttaatcaggcacaagccttggggattggt
aatttagggggtagttcatcaccttcgatttcgggtgtagggaatttaggtatgaagagg
gtcccacaaaaaccgcctgttcatcccccaggaccatctgggggaatgaacttgatgtca
cctatgaaaaatgcaatggagcttactcctgcggctatggcccgaagaaagaaacaaaaa
actcaggagaagcatttgagtgggagggtagctcctatattgccggagtctgcattgtat
acgcaacttctcgagtttgagtctcgtgttgatgctgcattgatgagaaagaagattgat
attcaagagtctttgaaaaaccctccgtctgttcagaaaacgcttcgaatttatgtgttt
aatacctttgcaaatcagtcacagtctatcccgaagaagccaaacgctgaaccgcccact
tggaccttgaaaataattgggaggattttggaagatggaattgaccctgaacaagttgcg
gcaatgaaactgaatccattgcatccaaagttttcgactttttttaagagggttaccatc
ggtttggatcagagattgtaccctgaaaaccatttaattgtttgggagaattctcgctct
tctgctccaaccgagggttttgaggtgaaaaggaaaggagacaaagagttcacggtgaac
attcggtttgacatgaactatatacccgagaaattcaagctttcccaacccttaacagaa
cttcttggcatagaagccgagactcgcccaagaataatagctgctatatggcattatgtt
aaggcaaggaagttacagaaccaaaatgatccaagctttttcaattgtgatccacagctt
cagaaggtatttggtgaagaaaagatgaaatttaccatggtgtcacaaaagatttcgcag
catttgtctcctccgccaccgattcaggtggaacatcacctcaagctttctggtagtagt
ccttccggaaatgcttgttacgatatattagttgatataccatttccgatacagagagag
ctctcgatgctgctggcaaacaccgagaaaacgaaggagattgaaatctgtgatgaagca
atttgtgctgctataaggaaaattcacgaacaccgcaaaaggagagcgttctttctcggt
tttagtcaatccccatctgaattcatcaacgcgttgatagaatctcaaagccgagatctc
aaggtcgtttctggggaagctagtcgcagtgtagaaagagaacgccgatcagatttcttc
aaccaaccatgggttgaggatgctgttattcgctacttaacccgcaagccagccaatgcg
cccgatggtcctggtagcacataa
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