KEGG   Amaranthus tricolor (tampala): 130824160
Entry
130824160         CDS       T09367                                 
Name
(RefSeq) uncharacterized protein LOC130824160
  KO
K11797  PH-interacting protein
Organism
atri  Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:atri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atri04121]
    130824160
Ubiquitin system [BR:atri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     130824160
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_SCAP WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Bromodomain Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N VPS8_N WDR90_beta-prop_4th Beta-prop_IP5PC_F Auxin_resp
Other DBs
NCBI-GeneID: 130824160
NCBI-ProteinID: XP_057545039
LinkDB
Position
1:complement(36992108..37028489)
AA seq 1659 aa
MAFEKHFPASNQTANMKPLSFPLKVREKAALAVPELNPYAEADVDVDCREVYFLIMHFLS
GGPCQRTCGQFWNELLEHDLLPRRFHAWYSRSGRRSGDENDDGLSFPLSYNKLVERFAHI
EKDHLIKLLKQLLLSKVNVPHGIVTRNVPNAADVPTLLGTGPFSLLGCNMNKAESEVKPL
PVYMRWPHLQADQVRGLRLREISGGFGRHHRAPSTRAACYTIAKPSTMVQKMQNVKKTRG
HRNAVYCAVFDRSGRFVITGADDRLVKIWSMESAYCLASCRGHEGDITDLAVSSNNALVA
SSSNDCIIRIWRLPDGQPISVLHGHTGAVTAIAFSPRPSAAYQLLSSADDGTCRLWDARY
SQFKPRIYIPRPSDSVAGKSTAASSSTIQQNHQIFCCAFNASGTVFVTGSSDFLARVWNA
CKSGADDFEQPMHEMDVLSGHENDVNYVQFSGCAVASRFYFNDTSKEEKFPKFKNSWFSH
DNIVTCSRDGSAIIWIPRSRKSHGRAGRWTRAYHLKVPPPPMPPQPPRGGPRQRVLPTPR
GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLMGHTESTYVLDVHPFNARIAMSA
GYDGKTIVWDIWEGKPIRTYETGRFKLVDGKFSPDGTSIILSDDVGQLYILSTGQGESQK
DAEYDQFFLGDYRPLIRDTHGNVVDQETQLPPYRRNMQDLLCDSSMIPYPEPYQSMYQKR
RLGILGIEWRPFLLRCAVGPDFNSDQDQILPLPDLDMLIDPMPEFMDVMEWEPEVISDDT
DSEFNVTDSYGDDGEHNGSISSGDSESSEEDNEAECSHRDSVRKSKRRKKKRETEITTSS
GRRVKKRNLDECDGNSHNIEQHRRSRNGQKRSKKKSVKASRPQRRAARNALTLFSKIKGS
TSDQDEYCSEGESSVSESALEDSNFEGEESDMLSVEERGKNLKGKEVIIDNSEDTPKSKV
FTDSYENSLNTNRLVLKLPVRDSDRALFSRNSFPTSGNLTDLAGSSSSASGGSIEVDRNV
SALSTGFDRLGWPGGYGNYAMKWGGVKARLKRVKLSAAPPLKASGSCSFSDNQNETDDKR
VAEDGCGKLQEITDCKCERLENPNGLTNANNIELSDINLSLVCAQATADDKTLCSRSSDE
NNVLTLGDAMKKIVSEPNDHSEKTLLPGEGSERNMSCMEQRSVAEELEEHLKPDLDGDTN
GGIANACSTVLDSQTLHLEKNDRMYSAVYRRSRSLKAARTLAGKDAHMGENASSSCHQHL
NGNTNINGHIVNGFIQTNSAELRDTAEELFDQKRSMQRSRRTENSSPVGRRTREEGGSSM
TVGLRSTRNRRINFVHDASPSPMDRRKSSQSQRKLSWLMLSVPDYSRYIPQHGDEVAYLR
QGHQEYISCNRSSIIVRGPWEHLNGEIRAVEFCKVVELEYSIVPGSGDSCCKMILEFIDP
NSSVLGKRFRLTLPEVSDFPDFVIERTRYEAALEKTWTKRDKCQVWWKNEGDEDGSWWEG
RIHDVKAKSLDYPDSPWERYRIRYKSDPTEIHEHSPWELHNPDDPQWEQSHLDEHTTKKL
LSAFYKLLQSANKAQDIYGVQKLQQASEKSNFINRFAVPLSLEVILMRLENSYYRSLDAV
KHDIKVMLSNAEIFFAKNAEVSKKIARLSEWFENMPSPL
NT seq 4980 nt   +upstreamnt  +downstreamnt
atggcctttgagaaacactttcctgctagcaatcagactgctaatatgaaacctctgagt
ttccctctcaaggtccgggaaaaagctgcacttgctgttccagaattgaacccctatgca
gaggctgatgttgatgtagactgcagagaagtttatttcctcatcatgcatttcttgtct
ggtgggccatgtcaaagaacttgtgggcaattttggaatgagcttcttgagcatgatctt
ctaccgagaagattccatgcttggtattcaagaagtgggagacgtagcggtgatgaaaat
gatgatggcttatcatttccattaagttacaataaacttgtggagcggtttgctcatatt
gaaaaggatcacttaattaagcttctcaagcaactgttacttagtaaagttaatgtgcca
catggcattgtaacccgaaatgtacctaatgcagctgatgttcctacacttttagggaca
ggacccttttcactcttgggctgcaacatgaataaagcagagagtgaggttaaaccactg
cctgtttacatgcgttggcctcatttgcaagcagatcaggtgcgcgggctgcggttgaga
gaaattagtggtggatttgggagacaccatagagcaccatctactcgggcagcctgctat
actattgcaaaaccgtcaacaatggtgcaaaagatgcaaaatgttaagaagacaagggga
catcgcaatgccgtttattgtgctgtatttgatcgttcggggagatttgtcatcactgga
gcagatgaccgccttgttaagatttggtcaatggagtccgcctattgcttggccagttgc
cgtgggcatgaaggtgacattactgacttggctgtgagctccaacaatgctcttgtggca
tcgtcttcaaatgattgtatcattagaatttggcgtttgccagatgggcagccaatttca
gtcctccatgggcatacaggagcagttactgcgattgctttcagtccaagacctagtgct
gcgtatcagcttctatcatcagctgatgacggaacatgtagattatgggatgcaaggtat
tcccagttcaagccacgtatttatattcccagaccttcagattctgttgcagggaagagc
acagctgcttcttctagcaccatacaacagaatcatcagatcttttgctgtgcgttcaac
gctagtgggactgtctttgttactggtagctcagattttcttgcaagggtctggaatgct
tgcaaatctggtgcagacgattttgaacaacctatgcatgagatggatgttctgtctgga
catgaaaatgatgtgaattatgtgcaattcagtggttgtgctgtggcttcacgattctat
ttcaatgatacaagcaaggaggaaaaatttcctaaattcaaaaactcatggttttctcat
gataacatagttacctgttctcgtgatggaagtgccattatttggattccaaggtcacgt
aaatcacatggaagagctgggcgttggactcgggcatatcatctcaaggttcctcctccg
cccatgcctccacagcctccacgaggaggcccaagacaaagagttcttccaacacctcgt
ggtgttaatatgattgtttggagcttagataatcgatttgtccttgctgctattatggat
tgcagaatatgcgtctggaatgcagctgatggtagcttggttcattctttgatgggtcat
actgagtctacatatgtcctggatgttcacccttttaatgctcgcatagctatgagtgct
ggatatgatgggaagaccatagtttgggatatatgggaaggaaagcctattcgcacttat
gaaactggacgcttcaaactggttgatggaaagttctcaccggatgggacgtcaattata
ctttcagatgatgttggtcaactttatatcttgagcactggccaaggtgaatcccagaag
gatgcagagtatgatcagttctttctcggggattatcgcccacttatcagggatacacat
ggaaatgttgttgatcaggaaactcagcttcctccttaccgaagaaatatgcaagatctt
ctttgtgattcaagcatgattccatacccagaaccctaccagagcatgtatcaaaaaaga
cgtcttggaattctgggcatcgagtggcgtccttttttactcaggtgtgctgtgggtcca
gacttcaattctgaccaagaccaaattctccccctgccagacttggatatgcttattgat
ccaatgccagagtttatggatgtcatggagtgggaaccagaagtaatcagtgacgataca
gattctgagttcaatgtaacggattcctatggtgatgatggagaacataatggctcaata
tcttcaggagattcagaaagcagtgaagaagacaatgaagctgaatgtagtcacagagat
agtgttcgcaaatcgaaaaggagaaagaaaaagagagaaacggagataactacttcttca
gggaggcgtgtcaagaaaagaaatttggatgaatgtgatggtaattctcataacatagaa
cagcacagaagatcaagaaatgggcaaaaacggtccaaaaagaagtctgttaaggcttca
agacctcagagaagagctgctcgtaatgctcttaccttgttttctaaaatcaaaggtagt
acttcagatcaagatgagtattgttcggaaggtgagtcatcagtaagtgagtctgcgctt
gaagattctaattttgaaggtgaagaatctgatatgcttagtgtagaagagcgaggaaag
aatctaaagggaaaagaagtaattatcgacaattctgaggatacacctaaatctaaagtg
tttactgattcttatgagaattctttgaacacaaatagactagttttgaagcttccagtc
cgtgactccgatagagctctattttcacgtaactccttcccaacctctggaaatttgaca
gatttggcaggttcttcttcttcagcttctggtggctcaatagaagttgacagaaatgtt
tcagccctgagtacaggatttgatagacttggttggcctggtggatatggtaactatgct
atgaaatggggaggggtcaaggctcgtcttaaacgggtcaaattgagtgcagctcctccg
ttgaaagcttctgggtcctgctctttcagtgataatcagaatgaaactgatgataaacgt
gttgcagaagatggttgtggtaagttgcaggaaattactgactgtaaatgtgagcgttta
gaaaacccaaatggattaacgaatgcaaataatatagagctgtctgacataaatctatcc
ctggtctgtgctcaagcaactgccgatgataaaactctgtgctcaaggagcagtgatgaa
aacaatgttttgacgttgggtgatgcgatgaagaaaattgtgtcagaaccaaatgatcat
tctgagaaaacattacttcctggtgaagggagtgaacggaatatgtcttgcatggaacag
agatctgttgctgaagagctagaggaacaccttaaacctgatctagatggtgacactaat
ggaggaatagcaaatgcctgctctacagtattagattcacagactttacatttagagaag
aacgacaggatgtacagcgctgtatatagaagatcaaggtcacttaaggcagctaggaca
ttggctggaaaagatgcgcatatgggtgaaaatgcctcaagttcatgccatcaacatctg
aatggaaacacaaatattaatggtcatatagttaatggatttatccagaccaattctgca
gagcttagggacacagctgaagagctgtttgaccaaaagagatcgatgcagaggtcaagg
aggacagaaaattcttcaccagttggccgacgtactcgtgaagaaggaggatctagtatg
accgtgggccttcggtccacaaggaataggagaattaattttgttcatgacgctagtcct
agtccaatggataggagaaagtcaagtcagtcgcaaagaaagttatcttggcttatgctt
tctgtgccagattattctcgttatattcctcaacatggagatgaagttgcatatttgaga
caggggcatcaagaatatatatcatgcaataggtcttcaatcattgtgaggggaccttgg
gaacatttgaatggagagatcagagctgtggagttctgcaaagtcgtagagttagagtac
tctattgttccaggctctggagacagctgctgtaaaatgatactcgaatttattgacccg
aattctagtgtattaggaaaaagatttaggctgacattgccagaagtgtcggattttcca
gattttgtcattgagagaacaaggtatgaggctgctctagagaaaacctggacaaagaga
gataaatgtcaggtctggtggaaaaatgaaggcgatgaagacggtagctggtgggaaggt
cgaattcatgacgtgaaggctaaatctctcgactaccctgatagtccgtgggaaagatat
cgcatccggtacaaaagtgatcctactgaaatacatgaacacagtccttgggaacttcat
aatccggatgacccccaatgggaacaatctcatttggatgaacacaccaccaaaaaactg
ctgtcagctttttataagttgcttcaatcagcaaataaagctcaggatatttacggggtc
cagaaactgcagcaagcttccgagaagtcaaatttcattaacaggtttgcagtaccatta
tcgctagaagtgatcctaatgagactagagaatagctactatcgaagcttggatgcagtg
aagcacgacatcaaagtaatgctatcaaatgcagagattttctttgcaaagaatgcagag
gtctccaagaagattgcacgactgtcagagtggtttgaaaatatgccatcacccctgtag

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