KEGG   Amaranthus tricolor (tampala): 130824249
Entry
130824249         CDS       T09367                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03420  Nucleotide excision repair
atri04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130824249
  09124 Replication and repair
   03420 Nucleotide excision repair
    130824249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atri04121]
    130824249
   03400 DNA repair and recombination proteins [BR:atri03400]
    130824249
Ubiquitin system [BR:atri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     130824249
DNA repair and recombination proteins [BR:atri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      130824249
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      130824249
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A
Other DBs
NCBI-GeneID: 130824249
NCBI-ProteinID: XP_057545157
LinkDB
Position
9:complement(25930165..25947355)
AA seq 1089 aa
MSIWNYAVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDPESSELVTRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSRPTIVVL
YQDNKDARHIKTYEVSLKDKDFAEGQWSQHNLDNGADLLIPVPPPLCGVIIVGEETIVYC
SATAFKAIPIRPSITRAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAFVYVGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDVYDTFLVVS
FISETRILAMNLEDELEETEIEGFDSQVQTLFCHDALYNQLVQVTSSSVRLVSSASRELR
NEWKAPTGYSVNVATANASQVLLATGGGHLVYLEIGDGLLTEVKHAQLEYEVSCLDINPI
GENANYSRLAAVGMWTDISVRTFSLPDLNLITKENLGGEIIPRSVLLCSFEGISYLLCAL
GDGHLLNFALNMSTGELTDRKKVSLGTQPITLKTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQTRTFAICSLKYNQASAEDSEMHFIRLLDDQTFDIVSTYALDTYECGCSILSCSFSDD
GNVYYCVGTAYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGTHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDVYLGAENNFNLFTVRKNSEGATDEERARLEVVGEYHL
GEFINRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVIASLPHDQYIFLEKLQSNLRKV
IKGVGGLSHEHWRSFYNEKKTVDARNFLDGDLIESFLDLSRTRMDEISKSMGVSVEELSK
RVEELTRLH
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgagtatatggaactatgccgtcactgcgcacaaacccaccaacgttacgcattcatgt
gtcggcaatttcaccagtcctcaggagcttaatcttatcatcgcaaaatgcactagaatt
gagattcacctgttaactccccaaggtcttcagcccatgctggatgttccaatatatgga
agaattgcaacgctggagctttttcgacctcatggtgaagcgcaagattttttgtttatt
gctacagaaagatataaattttgtgttcttcaatgggatcctgagtcatcagagctcgtc
accagagcaatgggagatgtgtcagatcgcattggtcgtcctactgataatggacagatt
ggcatcattgatcctgattgtagattgattggactccatttatacgatggcttattcaag
gttattccatttgacaacaaaggacagttgaaagaagcctttaatatcaggcttgaggag
cttcaagtgcttgatataaagtttctttatggctgttcgagacctacaattgtagtactt
taccaggataataaagatgctcgtcatattaaaacatatgaggtttcattgaaggacaaa
gatttcgcggaggggcaatggtcccaacacaatcttgataatggggctgatttacttatt
ccagttcctcctccactttgtggagttataattgttggggaggaaacaatcgtatattgc
agtgctactgcatttaaagcaatccccattcgaccttcaattacaagagcttatggaaga
gtggatgctgatggctctcgctatttgcttggtgatcacgctggacttctgcatctgctt
gttattactcatgaaaaagagaaagttactggattgaaaattgagcttttgggagagact
tctattgcatcaacaatatcatatcttgacaatgcttttgtttatgttggctcaagctat
ggagattcacagcttataaagttaaacttacaaccagatgcaaaaggatcgtatgtagaa
gttttggaaagatatgtaaatttgggacccattgtagacttttgtgttgttgaccttgag
agacaaggtcaaggccaggttgtaacttgttctggagcatacaaggatggttctcttcgt
atagtacgcaatggaatcgggataaatgaacaggcatcagtggagcttcaaggtatcaag
ggcatgtggtcattgaggtcttcaactgatgacgtatatgataccttcttggtagttagt
ttcatcagtgagaccaggattttagctatgaatcttgaggatgaattagaagaaacagaa
attgaagggtttgactcacaagtgcagactttgttttgccatgatgctttgtacaaccaa
ttggtacaagtcacatcaagttctgttaggctggtcagttctgcatctagggagctacgg
aatgaatggaaagccccgacaggatattctgtgaatgttgctactgctaatgcttcccag
gttctacttgcaactggtggtgggcatcttgtctatttggaaataggtgatggacttttg
acggaagtgaaacatgctcaattggagtacgaagtatcttgccttgacataaatcccatt
ggtgaaaatgcaaattatagtcggttagctgctgttggaatgtggacagatataagtgtt
aggacattttcgcttccggatcttaatctaattactaaagagaatctcggaggagaaatc
attcctcgttctgttcttctatgttcttttgaagggatatcttatttgttgtgtgctctt
ggagatggccatttgttgaactttgcattgaacatgagtactggtgaattgactgaccgg
aagaaggtgtctctgggtactcagcctattacactcaagacattctcatcaaagaatact
actcatgtttttgctgcctctgatcggcctactgttatatacagcagtaataaaaagtta
ctttacagcaatgtaaatctcaaggaagtcagccatatgtgtccatttaactcagcagct
ttccctgacagccttgcaattgcaaaagaaggtgaacttacaattggcaccattgatgat
attcaaaaacttcatatacggtctatccctcttggcgagcatgcaaggcgaatctgccac
caggaacaaactcgcacttttgccatttgtagtttgaaatacaaccaagccagtgcagag
gattctgaaatgcattttatacgcttgttggatgaccaaacctttgatattgtatctacc
tatgcccttgatacatatgaatgtggttgctctatcctgagttgctcattctcagatgac
ggcaatgtttactactgtgttgggacagcatatgttttaccagaagaaaatgagccaacc
aagggaagaattttggtttttgttgtagaagatggaaagctgcaactcattgctgaaaag
gaaactaaaggtgccgtgtactcgcttaatgctttcaatggcaagctgcttgctgccatc
aatcagaaaattcagctctataaatggatgcttcgggacgatggtactcatgaattacag
tctgagtgtgggcatcatgggcacattcttgccttgtatgtgcagactcgtggagatttt
attgttgttggggatctgatgaaatcgatttctctgctaatatataagcatgaagaaggt
gcgattgaggagcgtgcccgggactacaatgctaattggatgtcagctgtagagattctt
gatgatgatgtgtatctgggtgcagaaaacaatttcaatctgtttacagtgaggaaaaac
agcgaaggtgccactgatgaggagcgcgcacgccttgaagtggtcggggaataccacctt
ggagaattcattaatcgcttccgtcatggttctctagtcatgagattgccagattccgaa
atcggtcaaataccaactgtgatatttggaactgtaaacggtgttataggtgtcatcgca
tcccttccacatgaccagtacatcttcctggagaagctgcaatcaaatttgaggaaggtt
ataaagggtgtaggaggattgagtcacgaacactggcggtcgttttacaatgagaagaag
acggttgatgccagaaatttcctcgatggagatctgattgaatcttttcttgatctcagt
cgtactcgtatggatgaaatctcaaaatcaatgggtgtttctgtagaggagcttagcaag
agagttgaggaattgacccgattgcactaa

DBGET integrated database retrieval system