KEGG   Amaranthus tricolor (tampala): 130824252
Entry
130824252         CDS       T09367                                 
Name
(RefSeq) exonuclease 1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    130824252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atri03032]
    130824252
   03400 DNA repair and recombination proteins [BR:atri03400]
    130824252
DNA replication proteins [BR:atri03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    130824252
DNA repair and recombination proteins [BR:atri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     130824252
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 MIT 5_3_exonuc TPR_1 TPR_2 HHH_5 TPR_11
Other DBs
NCBI-GeneID: 130824252
NCBI-ProteinID: XP_057545162
LinkDB
Position
9:26693765..26706253
AA seq 743 aa
MGIQGLLPQLKSIMSPIHIKELEGCCVAVDTYSWLHKGALSCSTQLCKGLPTSRHIDYCM
HRVNMLRHYGVKPILVFDGGDLPMKSEQENKRARSRKDSLSRAIEHESSGNTAGAYECYQ
KAIDISPAIAYELIQVLKQEGVYYIVAPYEADAQMTFLAITKQVDAVITEDSDLIAFGCP
RIIYKMDKYGQGVEYQFHKLQYNKDLNFTGFTIDMIQEMCILSGCDYLSSLPGMGLKRAH
SLISKFKTFEKVIKHLRYCCVAVPSLYEESFKKAKLTFRHQRVYDPIKEDIVNLTDVSDN
NDGDLDFLGPSVLKLLPQQVVRAIAKGELDPISKLPFQGENAHESPPCCKSYPIKDFKGE
STKVKLDLPAQKNVLTNYFCFASLEAKRNFRAPRISPKYTDSGNNSSPLTNQLSDTDAGI
ENDPSPDSLLGQVVQDEDMSLHNSMAVELSRNENADKDASVDGSLERNPLGQSHHSIHKP
CIILRRGHNDDRCSWPVPEKENQLDQHLNVKSPQLQNNSITESDTRKGSNKVNLRSSYFI
DKQEDNHPLKTSKKAVIKSSYFKREPKTAGSDIDSSCLVKEMSCINNEICDKILPALASV
GNKYDKDLSMKRKGSSHLNPIERVNNKHPRTKTIVEEKSAEPSPSYSPCDQPTEPEKFGC
KISHLEHYSDISGKSMEKFVSVVSSFRFTSSGSRASGLRAPLKDVKNISSRSTTATDLGK
FSYTPNSAKAKVKVKVKVKAKGA
NT seq 2232 nt   +upstreamnt  +downstreamnt
atggggatacagggactactgccgcaattaaaatcgataatgtcgccaattcacatcaaa
gaattagagggatgttgcgttgccgtcgacacttattcttggcttcacaaaggtgccttg
tcctgcagtacccagctttgcaagggtctccctacttctaggcacatcgactattgcatg
cacagagtaaatatgttgcgtcattatggtgtaaaaccaattcttgtctttgatggtggt
gatctgccaatgaagagtgagcaggagaataaacgtgcacgctctaggaaggatagtctt
tcacgtgctattgagcacgagtcaagtggaaatactgctggtgcatatgaatgctatcaa
aaggctattgatatatctccagcaattgcttatgaattaattcaggtcttaaagcaggaa
ggtgtttactatatagtggctccttatgaagcagatgcacaaatgacgtttttggcgatc
accaagcaggtagacgcagtaattactgaggactctgacctcatagcatttggttgtcca
agaattatctacaaaatggataaatatggacaaggggttgaatatcagttccataagcta
caatacaacaaagatcttaatttcacgggatttactattgatatgatacaagaaatgtgc
attcttagtggctgtgactatttgtcatcacttcctggtatgggcttaaagagagctcat
tctctgattagcaagttcaaaacatttgaaaaggtaatcaaacacttgagatactgctgt
gtggcagttccttcactgtatgaagagtcattcaagaaagcaaagttgactttccgccat
caaagagtttatgatcccattaaagaggatatcgtgaatctaacagatgtatcagacaat
aatgatggcgacttagatttcttaggcccatcagttcttaaattgctacctcaacaagta
gttagagccatagcgaaaggggagcttgatccgatctctaaactaccatttcagggtgag
aatgctcatgagagtccaccgtgttgtaagtcttatccaatcaaggattttaaaggtgaa
agcaccaaggtaaagctagatttgccagcacagaagaatgttctcaccaactatttctgt
tttgcatcactagaagcaaagagaaactttagggctcctcgaatttcaccgaaatatacg
gattcaggaaacaactcttctcctttgacgaatcaactttctgacactgatgctggtata
gaaaatgatccatcacctgattctttgcttggtcaagtggtacaggatgaggatatgtct
cttcataattctatggcagttgagttatctcgaaatgagaatgctgataaagacgcttca
gttgatggaagtctagaacgaaatcctttgggacaatcccatcattcaattcataaacct
tgcataattttgcgtaggggccataatgatgatcgttgttcatggccagttccggaaaag
gaaaatcagctggaccagcacttaaatgtcaagagccctcaattacagaataattcaatt
actgagagtgatacaagaaagggaagtaacaaagtcaatttaagaagctcttattttata
gataagcaagaagacaatcatccactaaagacaagtaaaaaggcagtcattaaaagttct
tacttcaagcgtgagcccaaaactgctggtagcgatatagatagcagttgcttagtcaaa
gaaatgtcgtgtattaacaatgaaatttgtgataaaatcttgccggcattggcttctgtt
ggcaataagtatgacaaagacttgtctatgaaaaggaagggttcttctcatcttaacccc
attgagcgcgtgaataataagcatcctcggacaaagacaattgtggaagaaaaaagtgct
gagccttccccttcatattccccttgtgatcaaccaacagaaccagaaaaatttgggtgc
aagatatcccatttggaacattactctgatatatcagggaagtcgatggaaaaatttgtt
tcggtagtatcgtcatttagattcacctcgtcaggttctcgtgctagtggactccgtgcc
ccattgaaggatgtcaagaacatatcctctaggtcaacaactgccactgacttgggaaaa
ttttcatatacaccaaatagtgcaaaggctaaggttaaggttaaggttaaggttaaggct
aagggagcttaa

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