Amaranthus tricolor (tampala): 130824274
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Entry
130824274 CDS
T09367
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03420
Nucleotide excision repair
atri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130824274
09124 Replication and repair
03420 Nucleotide excision repair
130824274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130824274
03400 DNA repair and recombination proteins [BR:
atri03400
]
130824274
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130824274
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
130824274
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
130824274
TCR (transcription coupled repair) factors
Cul4-CSA complex
130824274
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130824274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
KCNQ_channel
Motif
Other DBs
NCBI-GeneID:
130824274
NCBI-ProteinID:
XP_057545194
LinkDB
All DBs
Position
9:complement(26271710..26285409)
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AA seq
811 aa
AA seq
DB search
MSPPTHKRPSSASTASNVSITHNAAGTSFSPAMKKPKSQSLDSKNGIHSDDSASMIVDED
LKQSHDVVVSPSSNSRAANLSRKKATPPNPSTKKLVIKLVKAKPTLPPNFEEDTWATLKS
AINAIFLKQPDSCDLEKLYQAVNDLCLHKMGGSLYQRIEKECEAHVSAVLHSLVGQSPDL
VVFLSLVEKCWQDLCDQLLMIRGIALYLDRTYVKQTPNVKSLWDMGLQLFHKHLSLCPEV
EHKIVTGLLRMIEKERLGEAVDRTLLHHLLKMFTALGIYQGSFEKPFLACTEEFYAAEGA
KYMQQSDVPDYLKHVEIRLHEEHERCLLYLDASTRKPLISTAEKQLLEHHISGILDKGFM
MLMDGSRIDDLQRIYNLFSRVNALESLRQAISSYIRKTGQAIVIDEEKDKDMVSCLLEFK
AAVDKIWEESFSKNESFGNTMKDSFEYLINLRQNRSAELIAKFLDEKLRAGNKGTSEEEL
EGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTN
KLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELN
VYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKGKKELAVSLFQAVVLMLFNDAEKL
SFQDIKDATGIEDKELRRTLQSLACGKVRVLQKVPKGRDVEDDDSFEFNETFTAPLYRIK
VNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIK
PADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtctccccccacccataagcgcccatcttccgcttccaccgccagtaacgtcagtatc
acccataacgccgccggtacttcattttctccggcgatgaagaagcctaaatctcagtct
ctagactccaaaaatgggattcattctgatgattctgcttccatgattgtcgatgaagat
cttaaacaatctcatgatgttgttgtttccccttcttctaattctcgtgctgctaatcta
tctcgtaaaaaggctaccccacctaatccttctaccaagaagcttgttattaaactcgtt
aaagctaagcccacactacctcctaattttgaggaagatacttgggctactttgaagtca
gccattaatgctattttcttgaagcagcctgattcatgtgacctggagaaactttatcag
gctgttaatgacctttgcctgcacaaaatgggaggaagcctctatcaacgaattgagaag
gaatgtgaagcacatgtttctgctgtattgcattcattggttggccaaagtccagatttg
gtggtctttctgtcacttgttgagaaatgctggcaggatctttgtgaccaattgctgatg
attcgtggcatagctttgtatcttgataggacatacgtaaaacagaccccaaatgttaaa
tcattgtgggacatgggattacagcttttccataaacatctttctttgtgtcctgaagtt
gagcacaaaattgttactggccttttgagaatgattgagaaggaaagattaggtgaagct
gttgataggactcttctccatcatctcttaaaaatgtttactgctcttggaatttaccaa
ggaagctttgaaaaaccattccttgcttgcacagaggaattttatgctgctgaaggtgca
aagtatatgcagcagtcggatgttccagattacttgaagcatgttgaaataagattgcat
gaagaacatgaacgatgtcttctttacttagatgcaagtactagaaaacctcttatctca
acggctgaaaagcagctccttgaacatcatatttctggaatacttgataagggcttcatg
atgttgatggatggaagtcgtattgatgacctacagaggatttacaatttgttttctagg
gtcaatgcccttgagtcacttaggcaggctattagttcttacattcggaaaactggtcag
gctatcgttatcgatgaagagaaagataaggatatggtgtcttgcctcttggagttcaag
gcagcagttgataaaatatgggaagagagtttttcaaagaatgaatcatttggcaatact
atgaaagattcatttgaatatctcattaatctgcgtcagaaccgttcggcggagctgatt
gcgaagtttcttgatgaaaagctccgtgctggaaataagggaacatctgaagaagaattg
gagggcactctggataaagtcttagtcttatttcgatttatacagggcaaggatgtattt
gaagcattttacaagaaggatcttgcaaagaggcttttgttgggaaagagtgcttcaatt
gatgctgagaagtcaatgatatcaaagctcaaaactgagtgtggtagtcaatttacaaac
aaacttgaaggaatgttcaaggatattgaattatcgaaagaaataaatgaatctttcaag
caatcatctcaagctcggacaaaacttccgtcaggaatcgagatgagtgtccatgtctta
accacaggatactggccaacataccccccaatggatgttcgactcccacatgagttgaat
gtataccaggacatatttaaagagttttaccttagcaaatacagtggtagacggttaatg
tggcaaaattcactgggtcactgtgttctgaaagcagacttcccgaagggtaaaaaggag
cttgcagtttccctctttcaggctgtagttttgatgctatttaatgatgctgagaagctg
agcttccaagatattaaggatgccactgggattgaggataaagaactgcgaagaactctc
caatctcttgcttgtggtaaagttcgtgtccttcagaaggttcctaaaggcagagatgtg
gaggatgatgactcgtttgagttcaatgagacatttactgctccgctttatcgtataaag
gttaatgcaatccagatgaaggaaacagtggaggaaaacacgagcaccactgagagagta
tttcaagatcgtcaatatcaggttgatgctgctatagttcgtattatgaagacgcgaaaa
gtgcttagtcatactcttctaataaccgaactcttccaacagctcaagtttcccataaaa
ccagctgatctcaaaaagaggatcgagagccttatagacagagagtatttggagagagac
aagaataatcctcaaatatacaactacttggcgtaa
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