Amaranthus tricolor (tampala): 130824365
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Entry
130824365 CDS
T09367
Name
(RefSeq) U3 snoRNP-associated protein-like YAO
KO
K14793
ribosomal RNA-processing protein 9
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atri03009
]
130824365
Ribosome biogenesis [BR:
atri03009
]
Eukaryotic type
90S particles
Other 90S particles
130824365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SCAP
VPS8_N
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
130824365
NCBI-ProteinID:
XP_057545321
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Position
9:25114572..25122071
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AA seq
515 aa
AA seq
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MKGKNPKRKPTTINNKGKKNSTNQDSFFKEKNSKKRRKIESEEFDAEIDSDDASDEEDDF
FVDRDGGDEKDEHDELEDEGVEEKRRRLGWELVEKFRKFQKDEQEQMNDDIDSEREDRDS
RVASILQQKQLEDSGRLRRLIASKLRKPEDNEEPQLVIKHRQSVTAVALSDDDRRGFSAS
KDGCITHWDVEIRKAEKYLWPTEGVLKSHGMEDPKKRAKHSTKILDLAVSSDGRYLATGG
LDRHVHIWDTRTREHIKAFPGHREPVSCLAFREGTAEVFSGSFDRTVKIWNAEDKAYITT
LFGHQSEVLSIDCLRKERALTVGRDRTMQLFKVPEESHLVFRSSASSLECGCFVGDDEFL
SGSDDGSIELWSILRKKPVSIIRNAHVLSSVNKHANLEDDGRISNGHFDGSEIKANNSIS
TAQSWVSSVTVCRNSDLAASGAGNGCVQLWAINSDNKGILPLFSVPLVGYVNSLAIAKSG
RFLIAGIGQEPRLGRWDRNSDAKNGVALQSFEITS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaaaaaaccctaagagaaaacccaccaccataaacaacaaagggaagaagaat
tccacaaatcaggattcgttcttcaaggaaaaaaactctaagaagcgacgcaaaatcgaa
agtgaagaatttgatgcagaaattgatagcgatgatgcgtcagatgaagaggatgatttt
tttgtggacagagatggtggtgacgagaaggatgaacatgatgaattggaggatgaaggt
gtggaggaaaaacgtcggagattgggttgggaattggttgagaaattcaggaagttccag
aaggatgagcaagaacaaatgaatgatgatattgatagtgaaagggaagatagggattct
cgtgttgcttctattttgcagcagaaacagcttgaagatagtggtagacttcgtagactc
attgcttccaagttacggaagccagaagataatgaagaaccacagttagtgataaaacat
cgtcagtctgtaactgctgtagctctgtctgatgatgacaggagagggttttcggcgtcc
aaggatggttgtattacccattgggatgttgaaattagaaaagcagaaaaatacctctgg
cctactgagggagttctgaagtctcatggtatggaagatccaaagaagcgagctaagcat
agtacaaaaattctggatttggctgtcagttccgatggtcgttatctggcgactggcggt
ttggatcgtcatgttcatatatgggatacacgtacacgggagcatattaaggctttccca
ggtcatagagaacctgtgtcatgcttggcatttagagaagggactgcagaagtcttttct
ggttcatttgatagaacggttaagatctggaatgcagaagataaggcatacataacaaca
ttatttggtcatcaaagtgaggtgctaagtatagattgcttgcgaaaggaacgtgcattg
actgttggacgtgatcgaactatgcagctttttaaggttccagaggaatcacacctagtt
tttcgttcttctgcgtcatctcttgagtgtggctgctttgttggtgatgatgaatttctg
tctggatctgatgatggaagcattgagctgtggagcatattgcgtaagaagccagtttcc
attattagaaatgctcatgttctatcttcagtgaacaagcatgcaaatctagaagatgac
ggaagaatatctaatggccattttgatggtagcgaaatcaaagcaaataattcaatttca
acggcacagtcttgggtcagctctgttactgtatgcagaaatagtgaccttgctgcatct
ggtgcgggaaatgggtgtgttcagttatgggcaatcaatagtgataataaaggcattttg
ccgttattttctgttcctctggtggggtatgtgaattctttggctattgcgaaatctggt
cggtttttgattgctggtattgggcaggagcctcgtcttggaaggtgggatcgtaattcg
gacgctaaaaatggggtcgcgttgcaatcctttgaaattacatcatag
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