Amaranthus tricolor (tampala): 130824388
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Entry
130824388 CDS
T09367
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130824388
03036 Chromosome and associated proteins [BR:
atri03036
]
130824388
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130824388
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130824388
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
130824388
microRNA pathway
RISC loading complex
130824388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
130824388
NCBI-ProteinID:
XP_057545355
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All DBs
Position
9:complement(25351275..25361744)
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AA seq
1075 aa
AA seq
DB search
MVRKKRSEQSAGGESSYSQQGGRGGGGQTGPAGGNPGGGRGGGQTGPPQAGGGRGWVPQG
QGGRGGYGGRGGSQQGGMSSQQSGGPVEYQGRGAQQHPRGGAPPQRRGGGGRGGRGGPAG
GPFHTSVSELHQATQGSYQPGALPPQAMTSGKPVEQAEASSAVSPVQTGPSQVQQQFEQL
SVQESSSQAIQPLPASSKSVRFPLRPGKGSTGTRCIVKANHFFAELPDKDLHQYDVSITP
EVASRGVNRAVMEQLVRLYRESHLGRRLPAYDGRKSLYTAGPLPFTIKDFKITLVNEDDG
TGAPRREREFKVVIKLAARVDLHHLGMFLQGRQADAPQEALQVLDIVLRELPTSRYSPVG
RSFYSPDLGRRQPLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLL
NRDVTSRPLSDSDRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGT
MKSVVEYFYETYGFVIQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITAL
LKVTCQRPQERERDIVQTVHHNAYHADPYAQEFGIRIDERLASVEARVLPAPWLKYHDSG
REKNCLPQVGQWNMMNKKMVNGGKVNNWICINFSRNVQDGVARSFCSELAQMCHISGMVY
NPEPVLQVLTARPDQVEKALKTRYHDAMTKLQPQNKELDLLIVILPDNNGSLYGDLKRIC
ETELGIVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTII
FGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLYKTWNDPSRG
PVTGGMIKELLISFRKSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQ
PPVTFVVVQKRHHTRLFANNHHDRNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQ
GTSRPAHYHVLWDENNFTADELQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYM
EPETSDSGSMTSGAAAGRGGMAAAGGRSTRLPTTNAAVRPLPVLKENVKKVMFYC
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaaaaagagaagcgaacaatctgctggaggagagagctcctactctcagcaa
ggtggaagaggtggaggtggccaaacagggcctgcgggtggaaacccaggtggtggaaga
ggtggtgggcaaacagggcctccacaagctggtggtggaagaggttgggtacctcaggga
caaggaggtcgtggaggatatggaggtcgtggtggtagccagcaaggtgggatgagctca
caacaatctggtggacctgttgagtaccagggcagaggtgctcagcagcatccacgtggt
ggggctccacctcagcgccgtggtggtggtggccgtggtggccgtggcggacccgctggc
ggacccttccacacatcagtttccgagctgcaccaagctacccagggttcataccaacct
ggggctctgcctcctcaagcaatgacttctggtaagccagtggaacaggctgaggccagt
tctgctgtgtcccctgtgcagactgggccatcgcaggttcagcaacagtttgagcaactg
tctgttcaggagtcatcttctcaggctatacagcctctgcctgctagtagcaagtcagtg
aggtttcctctccgacctggcaaggggagtaccggtacgaggtgtattgtgaaagcaaat
cacttctttgctgaattacctgataaggatttgcaccaatatgatgtctctattacccca
gaggttgcatcacggggtgtgaatcgagctgttatggagcaattggtgaggttgtacaga
gaatctcatcttggaaggcggcttcctgcttatgatggaagaaaaagtctctacactgca
gggcctcttccatttactattaaagattttaagattacgcttgttaatgaggatgatggg
actggggcaccaaggagagaaagggaatttaaagttgtaatcaagctggctgcacgagtg
gatttgcatcatttaggcatgtttttgcaaggcaggcaggcagatgcacctcaagaagct
cttcaggttcttgacattgtactgcgtgaactgccaacttctcggtactcgccggtaggc
cgttcattttattcacctgatcttggaaggaggcaaccccttggggatggtttggaaagc
tggcgtggattctatcaaagtatccgtcctactcagatgggtctatccttgaatatagat
atgtcttctactgccttcattgagccgttgcctgtcattgactttgtgacccagctgctg
aaccgggatgtcacatctaggccattgtccgattccgaccgagtcaagatcaagaaggct
ctgagaggggtgaaggttgaagttacacatcgaggaaatatgcgtagaaaatacagaata
tctggactaacatctcaagcaactagggagctcactttccctgttgatgaaagggggaca
atgaagtcggtagtggaatacttctatgagacctatggttttgtgattcaacacacacaa
tggccatgcctacaggttggaaatcagcagaggccaaattatttgcccatggaggtttgt
aagattgttgagggacaacgatattccaaaaggttgaatgaaaggcaaatcacggctttg
ttgaaggtgacttgtcagcgtcctcaggaaagagagcgcgatattgtccagactgtccat
cacaatgcataccatgctgatccttatgctcaagagtttggcattagaattgatgagagg
cttgctagtgttgaagcacgtgttcttcctgctccttggctcaaataccatgacagcggt
agggagaagaactgtctgccacaagttggccaatggaatatgatgaataagaaaatggtt
aatggtggaaaggtgaacaactggatatgcatcaatttttctcgcaacgtgcaagatgga
gttgctcgcagtttttgctctgagcttgcccaaatgtgtcatatttctggcatggtctac
aatccagaaccagtgctacaagttctcactgctcgtccagatcaagttgagaaggctttg
aagactcgataccatgatgccatgacaaaattgcagccacagaacaaagagctagacctg
cttattgtcattctccccgataataatggctctctctatggtgatctgaaacggatttgt
gaaaccgagcttggtattgtgtcacagtgctgtttgacaaaacatgtgtttaagatgagt
aagcaatatttggcaaatgttgctttaaaaattaatgtgaaggttggtggaaggaataca
gtacttgtcgatgcattgtcaaggcgcatacctcttgttagtgataggccaaccattata
tttggtgcggatgtcactcaccctcacccgggagaagactcaagtccatccattgccgct
gttgttgcctctcaagattggcctgaggtcacaaagtatgctggtcttgtttctgcacaa
gctcatcgccaggagttgatccaagatctgtacaaaacctggaatgatcccagtaggggc
cctgttactggtggaatgataaaggaactccttatttctttccgtaagtcaacaggccat
aagccactgcgtatcatattctacagggatggtgtcagtgaaggtcaattttatcaagtg
ttgctgtatgaacttgatgctattagaaaggcatgtgcttccttggagccgaattatcaa
cctcctgtgacgtttgttgtggttcaaaagcgtcatcatacaagattgtttgccaataat
catcatgacagaaattcagttgataggagtggcaacatattacccggtacagttgttgat
tctaagatttgtcacccaactgaatttgacttttacttgtgtagccatgctggcattcag
ggtactagtaggcctgctcattaccatgttttatgggatgaaaataacttcacagctgat
gagttacagtctttaacaaataatctgtgttatacgtatgcaaggtgtactcgatctgtt
tcagttgttccgccggcatattatgcccatctagctgcatttcgtgctcgtttctatatg
gagccagagacatcggatagtggctcaatgacaagtggtgctgctgctggtcgtggaggg
atggctgctgctggaggtcgaagtacaaggctacctactactaatgctgctgtgcgtcct
ctgccggttctgaaagagaacgtgaagaaagtcatgttctactgctga
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