Amaranthus tricolor (tampala): 130824655
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Entry
130824655 CDS
T09367
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A-like
KO
K14026
SEL1 protein
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130824655
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Motif
Pfam:
Sel1
ARM_TT21_N
TPR_7
TPR_19
Motif
Other DBs
NCBI-GeneID:
130824655
NCBI-ProteinID:
XP_057545725
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Position
9:25525019..25532976
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AA seq
677 aa
AA seq
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MRRISTGRIAGTSLIITIFCLLPFHSLSRPFVLVLTQDDLKDTVNNPFDDPNSEPDWDDF
GDTDSSSEEELDPGSWRPVLEKEELEHRFGDSSSLYYMGVSKMVSAASSGEVTLMAEASS
EIEVAAKGGDPHARSVLGFLYDMGIGREINKAKAFMYHYFAANGGNLQSKMALAHFYARQ
DMYEQAVKLYGELAQVAVNSFMISKDSPVMEPVRIHVGAEENKEALRKSKGEDDEDFQIL
EYQARKGNAVAMYKIGIFYYFGLRGLRRDPSKALSWFLKAVEKGEPKSMELLGEIYVRGI
GVERNYTKALEWLALAAKHQLYSAYNGIGYLYVKGYGVDMKNYTKAKEYFEKAAENEDPG
GYYNLGVLYLKGMGVKKDVKRACKFFILASNQGQPKAFYQLAKMFHTGVGLKKSLETATA
LYKLVAERGPWNSLSRWALEAYLKGDVGKALLLYSRMAELGYEVAESNAAWILDKFGERS
MCIGASGLCTDTERHQRAHSLWWQASEQGNEHAALLIGDAYYYGRGTDRDYERAAEAYMH
AKSQANAQAIFNLGYMHEHGQGLPFDLHLAKRYYDQALEIDSAAKLPVTMALTSLWFRKN
YANSFLVRTIDSLPDVYPKIEAWVENILMEEGNATILTLFVCLLTVLYLREWQRRNAVNQ
ADDVAQPLNEPPIQAPH
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggatctccaccggccggatcgccggaacctctctcatcatcaccattttctgt
ctccttcctttccattccctttctcgtccctttgtccttgttctcactcaagatgatctc
aaagacaccgtcaataatcctttcgatgatccaaattccgaacccgattgggatgatttt
ggtgataccgattctagctccgaggaggagcttgatcccgggtcatggcgacccgttctt
gagaaggaagaactagagcatcgttttggggattcttcgtctttgtattatatgggtgtt
tcgaaaatggtatcagctgcgagttcaggtgaggttacattaatggcggaagcttcatca
gagattgaggttgctgctaaaggtggtgatcctcatgctcggtctgtacttggttttttg
tatgatatggggattggtagagagattaataaagctaaggcgtttatgtatcattatttt
gctgctaatgggggtaatttgcaatctaagatggctctcgctcatttttatgctcgccaa
gatatgtatgaacaagcagtaaaattatatggtgaattagcacaagtggcagtgaatagt
tttatgatttctaaggattcccctgtaatggagccagtaagaattcatgttggagctgag
gaaaacaaggaagcattgaggaagtctaagggggaagatgatgaggattttcagattctg
gaataccaagcacgaaagggtaatgctgtagcaatgtataaaattgggatattctattat
tttggacttagaggattgcgccgtgatccttccaaggcattgtcttggttcttgaaagca
gttgagaaaggagagcccaaatcaatggaacttcttggggagatttatgttagaggaatt
ggggtggagaggaattatactaaggctcttgaatggcttgctcttgctgctaaacaccaa
ctttactcagcttataatggaattggatatttgtatgtcaaaggttatggggtcgatatg
aagaattataccaaggcaaaagagtattttgaaaaagcggctgagaatgaggatcctggt
ggctattataatcttggagtcttgtatcttaaaggtatgggggtaaagaaggatgtgaaa
cgtgcttgcaaattttttatattggcttcgaatcaaggtcaaccaaaggctttctatcag
ttagcgaaaatgtttcatactggtgtgggtctgaagaagagtcttgaaacggccactgca
ttgtacaaattagttgcagaacgaggaccatggaattccttatctaggtgggcactagag
gcctacttgaagggtgatgtaggtaaagcattgctcctgtactccagaatggcagagctg
ggttatgaggtagcagaaagtaatgctgcgtggattcttgataagtttggggaacgtagc
atgtgtattggagcatctggattatgtacagatactgaaagacaccagcgtgcacattct
ttatggtggcaagcttctgagcagggtaatgaacatgcagccttgttgataggagatgca
tattattatggtaggggaacggacagggattatgagcgtgctgctgaggcgtatatgcat
gctaaatctcaggctaatgcgcaagcaatttttaatcttgggtacatgcacgagcatggt
cagggtcttccttttgatcttcatcttgctaaacgctactatgatcaagcattggaaatt
gattctgcagcaaagttacctgtcaccatggcacttacaagcttatggtttcggaaaaat
tatgccaacagttttttggtgcgcacaattgattctctaccagatgtgtatccgaagatt
gaagcatgggttgaaaacattctcatggaggaaggaaatgccacaatactgactcttttc
gtttgcttactgacggtcctttaccttcgtgaatggcaacgtaggaatgcagttaatcag
gctgatgatgtcgcacaaccgctcaacgagccgcctatccaagccccacactga
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