Amaranthus tricolor (tampala): 130824656
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Entry
130824656 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130824656 isoform X1
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atri03400
]
130824656
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
130824656
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_RanBP
HCS_D2
Motif
Other DBs
NCBI-GeneID:
130824656
NCBI-ProteinID:
XP_057545726
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Position
9:complement(28097022..28104115)
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AA seq
554 aa
AA seq
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MLLSTTTPTLKPLLLHSSHHLLHHLQSTKNPNKTHQNPQFQPILISSITMLTSSSWSCPK
CTFLNPPSQSSSCQICLTPFSHPSSSSSSSPLKWACKACTFLNFYSRSNCEICDTRNSIN
FLELDSTDPDDDLTGASSVGSVFFPLRRCNSGRVDDDVGLKETVQIQSGSDQFVDQGIQF
GGSRNKRKLQDPDSENADALRSFTAKKKENALGMKGVTSAKTDTADDSVTFKRKLCDRSN
FIDKPVKVDGFREVKSSKKMVSVLDSVNDFGVENLENLKEVSSAIKILSYNVWFAEDLEV
HRRMQAIGDLIRLHTPDVICLQEITPNIYYILQNSTWWKKYRCSVSYERAASEVYFCMQL
TKLPLKSFRCEQFSLTRMGRELCVAEMKVNENKSLVVATSHLESPTPGPPTWDQMNSKER
VNQAKEAVNFLKGFPNVVFCGDMNWDDKLDGQFPCAEGWFDAWEKLRPTEIGYTYDTKSN
KMLTGNRSLRKRLDRFICCLTDFEVCSIDMIGTEEIPDLTYSKTRKIKNKIQELTCPVLP
SDHFGLLLTITSMK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgcttctttccactacaactccaactctaaagcctcttctactccattcttcccaccat
cttcttcatcatcttcaatccaccaaaaaccctaataaaacccatcaaaatccccaattt
caacccattttaatttcctcaattacaatgttaacatcttcttcttggtcttgccctaaa
tgcacgtttctcaaccctccttcccaatcatcctcctgccaaatttgcttaaccccattt
tctcacccttcttcatcatcttcatcttcacccctaaaatgggcttgcaaagcttgtact
tttttgaatttttatagtcgctcaaactgtgaaatttgtgacactcgtaattcaattaac
ttcctagaattggattctactgacccggatgatgatcttaccggagcttcatctgtgggc
tctgttttcttccccttgcgccgttgcaattcgggtcgggttgatgatgatgtgggttta
aaggaaacggttcaaattcaatcgggtagtgatcaatttgttgatcaaggtattcaattt
ggtgggtctcgaaataagcgcaaattacaagacccagattctgagaatgctgatgctctc
cgctccttcactgcaaagaaaaaagaaaatgctttaggtatgaagggcgtaacatcagca
aagacagatactgcggacgacagtgttacgtttaagaggaaactctgtgaccgaagtaat
tttatcgataagcccgtcaaagtagatggatttcgcgaggttaagtcctccaagaagatg
gtttcagttttagattctgttaatgattttggtgtggagaatctcgagaatctcaaggaa
gtttccagtgcaataaagattctgtcttacaatgtttggtttgcagaagatttagaggtg
cataggagaatgcaagcgattggcgaccttattcggctacacactcccgatgtcatttgt
cttcaggagatcactccgaatatatattacattcttcaaaattctacgtggtggaagaag
tatcgttgttctgtttcttatgaaagggctgcttccgaggtttacttttgcatgcagtta
accaaacttccgttaaaatcattccgctgtgaacaattcagcctcacaagaatgggcaga
gaactctgtgtagcggaaatgaaagtgaacgagaacaagtcactagtggtggctactagc
catctcgagagtcctaccccaggtcctccgacatgggatcaaatgaactcgaaggagcga
gtcaatcaggctaaagaagctgtaaactttctaaaaggatttccaaatgtcgtattttgt
ggcgacatgaactgggatgataaactcgatggtcagttcccgtgtgctgaaggatggttc
gatgcttgggaaaagctgagacctaccgagattggatatacatatgataccaagtccaac
aagatgttaactggtaaccgttctctacgaaaacgtcttgatagatttatctgttgtttg
actgatttcgaggtttgcagcatcgatatgattggaaccgaggaaatacccgatctgact
tacagtaagacgaggaaaatcaagaacaagatccaagaattaacctgtccagttttgcca
agcgatcatttcggtttgcttttgaccattactagtatgaagtag
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