Amaranthus tricolor (tampala): 130825024
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Entry
130825024 CDS
T09367
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130825024
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
130825024
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Ortholog
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GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
UBA_RAD5A
CUE
Motif
Other DBs
NCBI-GeneID:
130825024
NCBI-ProteinID:
XP_057546034
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Position
10:1712519..1720991
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AA seq
292 aa
AA seq
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MNGGPSGFNNAPVTRAVIIFSALFTVFFGLQGRSNKIGLSYLDIFQKPQLWKVIVSTFAF
TSTPEMMFGLYLLYYFRVFERQIGSNKYSVFILFSLAVSFLLGSFTLALLRDPKALITSG
PYGLIFASFVPFFFDIPVSTRFRVFGSRFSDKSFIYLAGLQLLLSSWKRSILPGICGIIA
GSLYRMNIFYIRRAKLPDFIASLFSRLSWLSTSSPSSANGIRSVSSSAPSYAGRQVERNF
SAPLVGPIEPSEESIAMLVSMGFNQDSARQALVQARNDVNVATNILLEAQAH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggaccatctggattcaataatgctcctgtaactagagctgttatcattttc
tctgccctctttaccgttttttttggacttcaaggacgttctaataagattggattatca
tatctggatattttccaaaaacctcaactttggaaggtcattgtctcaacctttgcattt
acgtctacgcctgagatgatgtttggattatatttgctgtattacttccgagtgtttgaa
agacagattggatccaataagtattctgtgtttattctattctcactggcagtttcgttc
ttgctaggcagttttacgttagcccttcttagagatcccaaagcccttatcacgtctgga
ccatatggactgatctttgcttcgtttgtacctttcttttttgatattcccgtgtcaact
cgattccgagtgtttggttcccgcttctctgataagtcgttcatttacctggctggtctt
cagctgcttttatcctcttggaaaagatctattctgccggggatttgcggtatcatagct
ggttctttataccgtatgaacatcttttacatccgcagagcaaagttgcctgatttcatt
gcttcactgttttcacggctatcttggctgtctacgagtagcccatcatcggcaaatgga
attaggagtgtatcaagttctgctccttcgtatgcaggacgacaagtcgagagaaacttc
tcggctcctcttgttggacctatcgaaccatcagaagaatccattgcaatgttagtatcg
atgggattcaaccaagactccgccagacaagcacttgtacaagctagaaatgatgtaaat
gtagccacaaatatcctccttgaagcgcaggcccattaa
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