Amaranthus tricolor (tampala): 130825053
Help
Entry
130825053 CDS
T09367
Name
(RefSeq) starch synthase 1, chloroplastic/amyloplastic-like isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00500
Starch and sucrose metabolism
atri01100
Metabolic pathways
atri01110
Biosynthesis of secondary metabolites
Module
atri_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
130825053
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
atri01003
]
130825053
Enzymes [BR:
atri01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
130825053
Glycosyltransferases [BR:
atri01003
]
Polysaccharide
Storage polysaccharide
130825053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Motif
Other DBs
NCBI-GeneID:
130825053
NCBI-ProteinID:
XP_057546061
LinkDB
All DBs
Position
10:complement(11633234..11641670)
Genome browser
AA seq
725 aa
AA seq
DB search
MDSFSLQSSHINGFCRSNLNFGSNPLVIRANKLLGFDYYWKQRSIRWPNFSLKCRTFVEG
IEGGVSSSTDGSKPVELHHEGNEELKGQLVGPVKPSSASIVRFHLFSQPANADDSNSKAT
GTLDLDEQVREQEVQEEDKDQDVQEIDDVEEHNCRVREAIDREGEDGSPAGVPSSVIPKQ
EVGNDSVVEDDFQEETVFEGEEKLLTKLKLSIVFVASEAAPYSKTGGLGDVCGSLPIALA
ARGHRVMVVSPRYMHGTAADKVYAGAFDANCRIKVNCFGGLQEVAFFHEYKNGVDWVFVD
HYSYHRPGNPYGDSHGAFGDNQFRFTLLCHAACEAPLVLPLGGYTYGDNCLFLVNDWHAG
LVPVLLAAKYRPYGVYKAARSVLVIHNLSHQGVEPGVTYDNLGLPSHWYGALEWVFPEWA
RAHELDKGEAVNILKGAIVTADRILTVSQGYSWEITTVEGGYGLHELLTNRKFVLNGIIN
GINVDEWNPSNDPLIAAPYNVDDLSGKAECKAALQKELGLPIKPDCPLIGFIGRLDYQKG
IDIIQEAFPQLMGDDVQFVMLGSGDARYERWMRAAEGACKDKFRGWVGFNIPISHKITAG
CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVETYNPFAVGTDGTGTGTGTGT
GWAFSPLAKESMLAALRNAIRTYRDYKESWVGLMKRGMLQDFTWDTAASQYEQVFQWAFI
DPPYC
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggactctttttctctgcaatcttctcatatcaatggcttctgtcggtctaatcttaat
tttggaagcaacccattggtgattagagctaataaactactgggttttgattattattgg
aaacagagaagtataagatggcctaatttttcacttaaatgtcggacttttgttgaagga
attgaaggtggggtttctagttctacagatgggtctaaacctgttgagcttcaccatgaa
ggaaatgaagagttgaagggtcaattagttggacctgttaagccttcttctgcttctatt
gttcggtttcacttgttttctcaaccagctaacgcagacgatagtaactcaaaggctacc
ggaaccctggatctggatgaacaagttagggaacaggaagtgcaggaagaagataaggat
caggatgtacaggaaatagacgatgttgaagaacacaactgtcgagttagggaggcaatt
gaccgtgaaggagaggatggatcccctgccggagtaccttccagtgtcatccctaaacaa
gaagtaggtaatgacagcgtggttgaagatgattttcaggaagaaactgtttttgaagga
gaggagaaactccttaccaaactgaagttaagcatcgtctttgttgcttcagaagctgca
ccatattccaagacaggaggtttaggagatgtttgtggttccttacctatagctctagct
gcacgtgggcatcgtgtaatggtagtttctcctcgatacatgcatggtacggctgcagat
aaagtttatgccggtgcatttgatgccaactgccgaattaaggtcaattgctttggtggg
ctgcaagaagtcgcatttttccacgagtataaaaatggtgttgattgggtttttgtcgat
cattattcctatcatcgaccaggaaatccatatggcgacagccatggtgcttttggggac
aatcagttccggttcactttgctttgtcatgctgcgtgtgaagctcctcttgttcttcct
ttaggagggtacacctatggggataactgtttgttccttgtcaatgattggcatgcaggc
cttgtaccagtacttcttgcagctaagtaccgtccatatggagtttacaaggctgcacgc
agtgtactcgtcatacacaacttgtctcatcaaggtgtggagcctggagtaacatatgat
aatttaggacttccttcacattggtatggagctctagaatgggtatttccggagtgggcc
agagcacatgaacttgacaaaggtgaggccgtcaatattttgaagggagccattgtgact
gctgatagaattcttactgtcagccagggttattcatgggaaataacaactgtggagggc
ggctatggtttgcatgaattactaaccaacaggaaatttgtattaaatggtattataaat
ggcatcaatgttgatgaatggaatccatccaatgatccgctaatcgctgccccttacaat
gtagatgatctctctggaaaggccgaatgcaaggcggctttacaaaaggagcttggtctt
cctataaagcctgattgcccattgatcggctttattgggagattggactaccagaagggt
attgatataattcaagaagcatttccacaacttatgggagatgatgtgcaatttgttatg
ttaggttcaggggatgctagatatgagcgttggatgagagcagcagagggcgcctgcaaa
gacaagttccgaggttgggttggatttaatatcccaatctctcataaaatcactgcaggg
tgtgacatccttttgatgccttcaagattcgaaccgtgtggactaaatcagctctatgca
atgagatatggaactataccagttgttcatgccacaggaggacttcgagatactgttgaa
acatacaatccttttgcagttggaaccgatggtactggtactggtactggtactggtaca
ggttgggccttttctccattggcgaaggagagtatgttggcggctctgagaaatgcaata
agaacatacagggattacaaggagtcatgggtagggttgatgaagagagggatgctacaa
gattttacatgggatactgctgcttctcagtatgagcaggtgtttcagtgggctttcatt
gatcctccatactgctaa
DBGET
integrated database retrieval system
