Amaranthus tricolor (tampala): 130825364
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Entry
130825364 CDS
T09367
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
130825364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atri03400
]
130825364
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
130825364
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
Mod_r
CCDC113_CCDC96_CC
VPS38
Ferritin_2
CorA
Motif
Other DBs
NCBI-GeneID:
130825364
NCBI-ProteinID:
XP_057546519
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All DBs
Position
10:complement(25043252..25054050)
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AA seq
238 aa
AA seq
DB search
MVTSTSQEETYARESCLKLEVGESSSSKESIFVKGTWFPSHFFLLITNGAEAWLCNALEE
DVKERASQWDQSESEYVKFAEKYLGFQQPDSVYRFSDAGNGFRKLSWTFEKEGIKLEWRW
RCKPSPNCKKTTAQVLDFLMDSNINLSEEVIKKTEAFEQLKEETQKCLVQSEKLITEKQE
FESEVYAKFVNVLNSKKAKLRELRDRISKLEAKGKLLHEEDDVSTDGTEPYHTESDEQ
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggtaacttcaacatcgcaggaagaaacctatgctagagaatcatgcttgaagcttgaa
gttggagaatcatcttcttctaaagagtctatttttgtcaagggcacttggtttccttct
catttctttctcctcattaccaatggcgctgaagcttggctttgcaatgcattagaagag
gatgtgaaagaaagggcaagtcaatgggatcaatccgagtcagaatatgttaaatttgca
gaaaagtatttagggtttcaacagcctgattctgtataccgtttttctgatgctggaaat
ggctttagaaagctgtcatggacatttgaaaaggaagggatcaaactggaatggagatgg
agatgtaagccatcaccaaactgtaagaaaactactgcacaagtcctggactttctcatg
gactcaaacatcaacttaagtgaagaagttatcaaaaagacagaggcatttgagcagttg
aaagaagaaactcagaaatgtttagtgcaaagtgaaaagttgatcactgaaaaacaagag
tttgaatcagaagtatatgcaaagtttgtgaacgtcttgaactcaaagaaggcaaaattg
agagagcttcgtgatcgtatttctaagctagaagctaaagggaagctgcttcatgaggaa
gacgatgtctctactgatggaaccgaaccatatcatactgaatctgatgaacagtaa
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