Amaranthus tricolor (tampala): 130825422
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Entry
130825422 CDS
T09367
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130825422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130825422
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
130825422
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130825422
Multi subunit type E3
ERAD complex
130825422
LMBR1L-GP78-UBAC2 complex
130825422
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
CUE
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_11
zf-ANAPC11
zf-C3HC4_2
zf-RING_5
zf-RING_16
zf-C3HC4_4
zf_RING_Vps8_fungal
PHD
zf-RING_Vps41
Prok-RING_4
zf_RING_Vps8
U-box_ZFPL1
RINGv
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
130825422
NCBI-ProteinID:
XP_057546625
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All DBs
Position
10:complement(22483852..22495513)
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AA seq
581 aa
AA seq
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MGVRYLAVSAVCTMVSVIGLQCWAEISVEKFKADGLIGKDTLYSENASLIIELLLRSHAM
ITLLAICVINTFVLFILSLKTIFFGELYATETRKLLERLANYVIYKGTFLPLIIPPAIFQ
ATLWLTWLTVLCFLKMFQALARDRLERLNASPSATPGTYFRVYSALLLVLAFDFIWIWFC
VAVSGPLVSSTYWLLFFEPLSIAFETLQAIVVHGFQLMDIWLHHSAAETTDCQRSKFFDS
TAGSLWEWKSNLVRNMGFFLDMMTLLMALGHYVLIWWLHGMTFHLVDAILFLNIRALLSA
VVKRIKGFIKLKIALGTLHEALPDAAPEEIQAYDDECAICREPMAKAKKLPCNHLYHLAC
LRSWLDQGLSENYSCPTCRKPLFVGRSESDATTHTRAVSSDEQLARQLSSGLDRANAGVG
AVGVFPDQNQNAPGDNAWRGADSSWLQPWPGQGLDGAGPSTAIRSAGLGRVQLMMRHLAS
VGETYAQTALEDSSWGLWPASSSQAPASSTAFPPAAHRYPVTIGAMHRRTASHPANDNIA
NLLAMAETVREVLPHIPDEMIFQDLQQTNSVAVTVNNLLQM
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcgttatctagctgtatcagcggtatgtacaatggtcagcgtgataggtcta
cagtgctgggctgagatatctgttgagaaattcaaggcggatggactcattggcaaggat
actctttactctgagaatgctagtcttatcattgagctgctgttgcgttctcatgcgatg
atcacattgctggcaatatgtgttataaatacattcgtgctatttattttgagcctgaag
actattttttttggggagctatatgccactgaaactcgaaagttgttggaacggctagct
aactatgtgatttacaagggaacatttcttccacttatcattccaccagcaatatttcaa
gccaccttgtggctgacttggttgactgttctttgttttctaaagatgtttcaagcattg
gcaagagatcgtcttgaacgtttgaatgcatctccttctgccacccctgggacatatttt
cgagtatattcagcactgttgttagttttggcctttgactttatatggatatggttttgt
gtggctgtatctggacctctggtttcatccacatattggttgttattctttgagccactc
agcatagcctttgagactctgcaggctattgtggtgcatgggtttcagttgatggatatc
tggctccatcattctgccgcagagaccactgattgccaaagatccaagtttttcgattca
acagcaggttctttgtgggaatggaaaagcaatcttgttcgaaatatgggatttttcctc
gatatgatgacactattgatggcacttggtcattatgtgcttatttggtggctccatggc
atgacattccatctcgttgatgcaatccttttccttaacattcgtgctttactaagtgct
gttgtgaagcgtattaaaggatttatcaaattgaaaatagctttaggcacacttcatgag
gcacttcctgatgctgcaccagaggagatacaagcatatgatgatgaatgtgccatctgt
agggaaccgatggcaaaggctaaaaagcttccttgcaaccacctttatcatcttgcatgc
ttgagatcttggttggatcaaggtcttagtgagaactattcatgccctacctgccggaaa
cccctttttgttggtagatctgaaagtgacgcaaccactcatactagagctgtttcaagt
gacgagcagcttgctcgtcaactaagttcagggcttgatcgggcaaatgctggagttgga
gctgtgggagtattccctgaccaaaaccaaaatgccccaggagataacgcttggagagga
gcagattctagttggttgcagccttggcctggccagggtcttgatggagctggtccgtca
actgccattaggtctgctggattagggcgggttcaattgatgatgaggcaccttgcttct
gttggggaaacttatgcccagactgctcttgaagattcttcatggggcctttggccagca
agctcttctcaggccccagcatccagtactgcattccccccagccgcacacagataccct
gtaacaattggtgctatgcataggaggactgcttctcatcctgcaaatgacaacattgct
aacttgcttgccatggcagaaactgtgagggaggtgcttcctcacattcctgatgaaatg
atttttcaggatttgcagcaaacaaactctgttgccgtgactgttaataaccttcttcag
atgtga
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