KEGG   Amaranthus tricolor (tampala): 130825443
Entry
130825443         CDS       T09367                                 
Name
(RefSeq) polyubiquitin 9-like
  KO
K03873  elongin-B
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130825443
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atri04121]
    130825443
   03400 DNA repair and recombination proteins [BR:atri03400]
    130825443
Ubiquitin system [BR:atri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     130825443
   Cul5 complex
     130825443
DNA repair and recombination proteins [BR:atri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     130825443
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N UBL_UBAC1 DUF2604 Ubiquitin_2
Other DBs
NCBI-GeneID: 130825443
NCBI-ProteinID: XP_057546663
LinkDB
Position
10:complement(10507220..10510380)
AA seq 102 aa
MYIRVKRNKSTYFIHCDPTEKVLEIKQKLQGIIDQPVDDQRLILLETGEVLDDSKTLAEE
KVENDAVVALTLKKDDDEFEDVNIEKPNDFYQARDSDGGSNW
NT seq 309 nt   +upstreamnt  +downstreamnt
atgtatattcgtgttaaacgtaacaagtcaacctactttattcactgtgatcctactgaa
aaagttttggaaataaagcagaaattacaaggtattattgaccagcctgttgatgaccag
cgattgattctcttagagacaggggaagtactggacgattccaagactttggcagaggag
aaggtggagaacgatgctgtggtggcattgaccttgaaaaaagatgacgatgaatttgaa
gatgtcaacattgaaaaaccaaatgatttctaccaagctcgtgattcagacggtggttcc
aattggtaa

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