Amaranthus tricolor (tampala): 130825490
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Entry
130825490 CDS
T09367
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130825490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130825490
03110 Chaperones and folding catalysts [BR:
atri03110
]
130825490
03029 Mitochondrial biogenesis [BR:
atri03029
]
130825490
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130825490
Enzymes [BR:
atri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
130825490
Messenger RNA biogenesis [BR:
atri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
130825490
Chaperones and folding catalysts [BR:
atri03110
]
Heat shock proteins
HSP60 / Chaperonin
130825490
Mitochondrial biogenesis [BR:
atri03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
130825490
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130825490
Exosomal proteins of other body fluids (saliva and urine)
130825490
Exosomal proteins of breast cancer cells
130825490
Exosomal proteins of colorectal cancer cells
130825490
Exosomal proteins of bladder cancer cells
130825490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
130825490
NCBI-ProteinID:
XP_057546726
LinkDB
All DBs
Position
10:281308..288427
Genome browser
AA seq
606 aa
AA seq
DB search
MASTFTSMSTMAAPGACVADKKPFTCADKLSSSSSISSSSAFGRRHNVVMRKSRSAKINA
MAKELYFNKDGSAVKKLQSGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKE
VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMIAEGVKVVAAGANPVLITRG
IEKTVKALVSELKSMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEG
KSAENSLYVVEGMQFDRGFLSPYFVTDAEKMIVEYENCKLLLVDKKITNARDLINILEDA
IRGGYPVLIVAEDIEQEALATLVVNRLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTV
IRDEVGLTLDKAGKEVLGNAAKVVLTKDSTTIVGDGSTQDAVNKRVAQIKNLIEVSEQEY
EKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLL
RLSSKVDAIKDQLEHEEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNLRYG
YNAATGQYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVDIKEPEPMPAGNPMD
NSGYGY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacattcactagcatgtctacaatggctgctcctggggcttgtgttgcggat
aaaaaacccttcacttgtgctgacaagctgtcatcatcgtcttctatatcttcttctagt
gcatttggtagacgacacaatgttgttatgaggaagtcacgttctgcaaagatcaatgcc
atggcaaaggaactgtactttaacaaagatgggtctgctgtcaagaagctgcaaagtggg
gtgaacaagcttgcagatttagtgggggtcacccttggtccaaaaggtagaaatgttgtt
ctagagagcaaatatggttctcctaaaatcgtcaacgatggtgtaactgttgcaaaagag
gttgagttggaggacccagtagaaaatattggggcaaagttagtgagacaggcagctgca
aagactaatgatttagctggtgatggaacaaccacttcggttgtccttgcacaaggaatg
attgcagaaggtgtcaaggttgtggcagctggtgcgaaccctgttttgatcactcgtggt
attgagaagactgtaaaagcattagtatctgaactgaagtcaatgtcaaaagaggttgaa
gacagtgaacttgctgatgttgcagctgtcagtgctggcaacaattatgaagttgggaat
atgatagcagaagcgatgagtaaagttggaagaaaaggtgttgtgacccttgaagaagga
aaaagtgctgaaaatagtctttatgttgttgaggggatgcagtttgatcgtgggttttta
tctccttactttgttactgatgctgagaaaatgatagtggagtatgagaattgtaagttg
cttttagttgacaagaagattacaaatgcaagggatctgatcaatattttagaagatgct
atcaggggaggataccctgtgttgatagttgcagaagatattgaacaagaagctttggcc
actcttgttgtgaacaggctgagagggtcattgaaaattgctgcacttaaggcaccagga
tttggtgagcgtaagagtcagtatcttgatgacattgctatccttacaggaggaactgtg
atccgagatgaggttgggcttacattggacaaggctggcaaagaggttttaggaaatgct
gcgaaggttgttcttactaaagattcaactacaatagttggtgatggaagcacccaggat
gcagtgaataaaagagttgctcaaattaagaatctaattgaggtttctgaacaagagtac
gagaaagagaagcttaatgaaagaattgctaagctttctggtggagtggccgtaatacag
gttggagcacaaactgaaactgagttgaaagaaaaaaagctgagagtagaagatgctctt
aacgcaacaaaggcggctgttgaagaaggtattgttgttggtggtggatgtactctactt
cggctttcatctaaagtggatgcgattaaggatcaacttgaacacgaagaagagaaggtc
ggagcagatattgttaaaagagcactcagctatcccttgaaattaattgccaaaaatgct
ggtgtaaacggaagtgttgtcagtgaaaaggtgctggcaaatgacaatctaaggtatgga
tacaatgctgccactggacaatatgaagacttgatggctgctggaattattgatccaacc
aaggtcgtcagatgttgtctggagcatgcatcttccgtagcaaaaacatttttgatgtcc
gactgtgtagttgttgacataaaagaacctgaaccaatgcccgcaggaaaccccatggac
aactctggatacggttactaa
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