Amaranthus tricolor (tampala): 130825532
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Entry
130825532 CDS
T09367
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130825532
Spliceosome [BR:
atri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130825532
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF5052
Motif
Other DBs
NCBI-GeneID:
130825532
NCBI-ProteinID:
XP_057546786
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All DBs
Position
10:complement(12770469..12782142)
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AA seq
452 aa
AA seq
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MASVSSQPQFRYTQTPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANKNQAFI
EFADLNQAISMISYYASSSEPAQIRGKTVYLQYSNRQEVVNNKTTADTAGNVLLVTIEGD
EARQVSIDCLHLVFSAFGFVHKITTFEKTAGFQALIQFSDTDTASSAKNALDGRSIPRYL
LPEHIGPCTLRINYSAHVDLSVKFQSHRSRDYTNPFLPVAPSAIDASGQLGVGVDGKKLE
PESNVLLASIENMQYAVTLDVLHTVFSAFGVVQKIAMFDKNGGLQALIQYPDVQTAVVAK
ESLEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTVPLHAVIQPAVPGPPAQMPGA
ANGPPYIGAQYPGPPSSGGWAATPQPPPPQHLHMQTPMQNYPYMTPGVAPPGPPGTMPPG
SMPQEMRPGPGSMYMQNPNGLPQPPAMPPYRQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtgtcgagtcagccacagtttcgttacacccaaaccccttcaaaggtgctt
cacttgagaaatttgccttgggaatgcacagaggaagagctgattgaattggggaagcct
tttggtaaagttgtcaacacaaagtgcaatgttggggccaacaagaatcaagctttcatc
gaatttgcggaccttaatcaagccatttccatgatatcatactatgcttcatcatcagaa
cctgcacaaatacgtggaaaaacagtttacctgcagtactccaacaggcaagaagttgtg
aataataagaccactgctgacactgcaggaaatgtgttattagtgacaattgagggagat
gaagctcgccaagtcagtatagactgcttacacttggttttttcagcatttggttttgtg
cataagattacaacttttgagaaaacggctggatttcaggcattgattcaattttctgat
acagatacagcatcttctgcaaagaatgctcttgatggaagaagcattccaagatacctg
cttccagagcatatagggccgtgtactctcaggataaattattctgcacatgttgatcta
agtgtgaaattccaaagtcaccgcagcagggactacactaatccattccttcctgttgcg
ccatctgctatagatgcatctggtcagctaggtgtgggtgtggatggtaaaaaattggaa
cctgagagtaatgtactgctggcatcgattgaaaatatgcagtacgctgtcactttggat
gttttacacacggtcttttctgcctttggagttgtgcagaagattgctatgtttgacaaa
aatggagggctgcaggctttgattcagtaccctgatgttcagacagcagttgttgcaaaa
gaatcccttgaaggccattgcatatatgatggagggttttgcaaactccacctatcttat
tcccgccatactgatttaagcattaaggtgaacaatgacagaagcagagattacacagtt
cctttacatgctgttatccaacctgcagttcctgggccaccagctcaaatgcctggagct
gctaatggccctccttatattggcgcacaatatccaggaccaccatcatctggaggctgg
gcagcaacaccacaaccaccaccacctcaacatctgcacatgcagacgccaatgcaaaac
tacccatacatgacgcctggtgtggcacctcctggtcctcctggcaccatgccaccaggt
tctatgccgcaagaaatgcgtcctgggcctggatcaatgtatatgcagaatccaaatggg
ttgcctcagccacctgcgatgcctccataccgccaatga
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