Amaranthus tricolor (tampala): 130825534
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Entry
130825534 CDS
T09367
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130825534
Transcription machinery [BR:
atri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
130825534
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
130825534
NCBI-ProteinID:
XP_057546790
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Position
10:complement(12803624..12809307)
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AA seq
519 aa
AA seq
DB search
MGFVTVSSSASRASLGLVGKSTAHQSSSNGPLILGFKVDKNKKTALVAVSKPSRLPAETK
KENQRRLRSLAKPSKGVRVASVAEATPLSSELDLNEAAAKLESIFKLSPAIDASDAENID
LAVKESRERRRERSDVDDKKERGTGSNVVRNRSRKAKRLSLAKRIEMKQSKEGKEEKKVP
LAPKKKSFNDEYDKIDTLVREYSSSTDLASLDWKKMKIPPVLPSSEHTWLFKLMEPMKTL
NQVKENLQQELGRDPTDNEMGEAMNMSVLQVRRHMEVGHTARNKLIKHNLRLVLFVMNKY
FQDFTNGPRFQDLCQAGVKGLIIAIDRFESRRKFRLSTYALFWIRHAIIRSMTISSFTRV
SFGLESVRVEIQKAKLELMFELKRIPTEEEIMKKVGISPERYQDVMRASNSVVSLHSRHL
VTQEEFINGIVDLDRGGSDQERQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL
GEIAGNLNISREMVRKHEMKALMKLKHPARVDYLRRHIP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgtgactgtctcaagctcagcctcacgagcttctctaggtttagttggaaaa
tcaacagctcatcaatctagttcaaatggtcccttgattctggggttcaaagtggataaa
aataaaaagacggccttagttgcagtgagtaagcctagtcgtttaccagcagagacaaag
aaagagaatcagagacgactaagatcacttgcaaagccttcgaaaggagttcgtgttgcc
agtgtagctgaagctaccccgttgtcttctgaattagatcttaatgaagctgcagctaaa
ctcgaaagcatttttaagcttagtcctgcaatagatgcttcagatgctgagaacatcgat
cttgcggtaaaggaaagccgagaaaggagaagggagagatcagacgttgacgataaaaag
gagagaggaacgggaagtaatgtggtgagaaacaggagtaggaaagcgaaaaggttgagc
cttgctaagagaattgagatgaagcaaagtaaagaaggtaaggaagagaagaaagttcct
ttagcaccgaagaagaaaagttttaacgatgaatatgacaagattgatacgcttgtaaga
gagtactcttcctcgactgatttggccagcttggattggaagaagatgaagataccaccg
gttcttccttcttccgaacatacttggttgtttaagttaatggaacccatgaagaccctt
aatcaagtaaaggagaacctgcaacaagaattggggagagatccaacagacaatgaaatg
ggcgaggcgatgaatatgagtgtacttcaagttaggagacacatggaagttggtcatact
gcaagaaacaagttgattaagcataacctgagactagtattgtttgttatgaacaaatat
ttccaagacttcacaaacggaccaagatttcaagacctctgccaagcaggtgtgaagggt
ctcattattgctattgatcgttttgaatcaaggaggaaattccggttgtctacttatgct
ctgttttggattaggcatgccatcatccgttcaatgactatttcaagctttactcgtgtc
tcctttggtcttgaatcggtcagggtggaaattcaaaaggcgaaactagaattgatgttt
gagctcaagagaattcctacagaggaagaaataatgaaaaaggttggaatctcccctgaa
agatatcaagacgtgatgcgagcttcaaattctgtcgtttcccttcactctaggcatcta
gtcacacaagaggagttcatcaatggcatcgttgatttagatcgtggcgggagtgaccag
gagaggcaacctgcccttcttagactcgcactcgatgatgtactcgactctctgaagccc
aaagaaagcttggttatccggcaaagatatggactagatggcaaaggcgacaggacacta
ggagaaattgccggaaacctgaacatttcgagagaaatggtcaggaagcacgaaatgaag
gcactaatgaaacttaagcatccagctcgagtggattatcttcggcgtcacataccctaa
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