Amaranthus tricolor (tampala): 130825557
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Entry
130825557 CDS
T09367
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130825557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130825557
Membrane trafficking [BR:
atri04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
130825557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
DCB
BIG2_C
Mon2_C
Motif
Other DBs
NCBI-GeneID:
130825557
NCBI-ProteinID:
XP_057546827
LinkDB
All DBs
Position
1:complement(10729729..10747646)
Genome browser
AA seq
1753 aa
AA seq
DB search
MASSQSLGGSTRCGKILGPSFDKIIKNVAWRKHTNLVSACKSAIDKLETLTELTSLSLSS
TIPTLSPADADYLLSPLLLALDTASPKIIDPSLDALFRLFSRNLLRFELDRSSDDNSNSV
IFQLIESVCKCCSLGDELIEFSVMKVILSAIRSPYVVFGGDYLNHIVKICYNVYLGGLNG
TNQICAKAILAQICLMVFARVEEDSMFVDKFKIVAVSELLEFTDRNLSEGNSVQLVQNII
NEVMDSNEGAEDIKPQTDSPRSGNGDGNASEHGDGDENENGNGNGNGSDGDESTVSTEEN
SGGEVKMEVISNGGVETSGERESKLRQDGFMLFKNLCKLSMKFSSQEHSGDEILLRGKIL
SLELLKVIMDNSGLVWRKNTNFLNIIKQFLCLSLLKNSALSVMTIFQLLCSIFMSLLTKF
RSGLKAEIGIFFPMLILRVLENILQPRFIQKMTVLNLLEKISQDPQLIIDIFVNYDCDLD
APNIYERTINGLLKTALGPPPGSTTTLPPVKDLTFRVESVKCLVRIVKSMGTWMDQQLKI
EESSLSYRSSVASGSVDVHSTLNGEEGTIPEYELHAETNSELSDAATFEQRRAYKIEMQK
GITLFNRKPSKGVEFLINTKKVGGSPEEVAAFLKNTAGLNPTIIGDYLGERDDFPLKVMH
AYVDSFYFEKMDFGEAIRYFLRGFRLPGEAQKIDRIMEKFAERYCKCNPNSFKTADTAYV
LAYSVILLNTDAHNNMVKEKMTKADFVRNNRGIDDGKDLPEEYLGSLYDQIVKDEIKMNA
ESSQPQSKQVNGFNRLLGLDGILNLVMGKQPEEKPLGTNSLLIKNIQEQFKAKSGKSESV
FYAVSDVSILRFMVEVCWGPMLAAFSMTLDQSDDKLATTECLQGFRYAVHVTAVLSMQTQ
RDAFVTSLAKFTYLHCAADMKQKNVDAMKTMMSIAIGDGNYLQDAWEHILTCLSRFEHLQ
LLGEGVPPDASFLSMSNAEPEQKSLMPSDLASLKKKGALQNPAVAAVVRGGSYDSSALGA
SSPKLVTPEQVTNFISNLHLLDQIGSYELNHIFAHSQRLNSEAIVSFVRALCKVSMAELQ
SPTDPRVFSLTKIVEIAHYNMNRIRLVWSRIWNVLSDFFVSVGLSENLSVAIFVMDSLRQ
LAMKFLEREELANYNFQNEFLRPFVIVMQKSSSAEIRELIVRCISQMVLTRVSNVKSGWK
SVFKVFTTAAADERKSIVLLAFETMEKIVREYFPYITETESTTFTDCVRCLITFTNSKFN
SDVSFNAIAFLRFCAVKLAEGGLFCNEDSQDDSSYDLSESGETADRQSFTGKDENTSFWM
PLLTGLSRLTSDPRSGIRKSSVEVLFNILMDHGELFSRPFWSAIFKFVVFPILNSRNKDD
NMLHDDQSPESSKDSSVSESPWDSETSSLAAERLVDLFVTFFSVVRSQLPDAVTVMANFI
KSPGPGPAKTGIAALVRLTSELGTRLSEDDWRGMLIAIKDAAASTLPGFLRVFRTMDNID
IPDAMESYQGLDMSSDNEISNNDLEDDNMHTAVYVISRMKSHIAVQLVIIQLVTDLYRTH
HDCLSTANLKILLELFSLISSHANQLSQEGIILGKLQTVCNRLELSEPPVVHFENEAYQS
YLNFLNDLMLERFSTSEDLDLEAQVVAVCERILEMYVDCAGTCSNKKVDSEPKTHWILPL
LSVKKEELAARSTLLLLALRTLSRMEKDSFKRYISRLFPLLVDLVRSEHSSTEVLPVLSD
MFLTCIGPIIVGF
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcgcaatctcttggaggttccactcgctgtggcaaaatcctcggcccatct
ttcgacaaaatcatcaaaaatgttgcttggagaaagcacacaaatcttgtttccgcttgt
aaatccgccattgataagcttgaaaccttaaccgagcttacttcactttctctctcctcc
acgatccctactttatcacctgccgacgccgactatcttctttctcctcttcttctcgcg
cttgatactgcttcaccgaaaattattgatccttctcttgatgcactttttcgactcttt
tcgcgtaatcttctgcggtttgaactcgatcgttcttcagatgataatagcaattcggtg
atttttcagttgattgaatctgtttgtaagtgttgcagtttgggagatgagctgattgag
tttagcgtaatgaaggtgatactgtcggcaattcgttcgccgtatgttgtgtttggaggt
gactatctaaaccacattgttaagatttgttataatgtttatttaggaggtttgaatgga
actaatcagatctgtgctaaggctattttggctcaaatttgtttgatggtttttgctcgt
gtcgaagaggattctatgtttgttgataagttcaagattgttgctgtttctgagttgctg
gaatttactgataggaatctgagtgaggggaattcggtacaattagttcagaatatcatt
aacgaggttatggactctaatgaaggggctgaggatattaaaccacagaccgatagccct
cggagtgggaatggagatgggaatgcgagtgagcatggggatggagatgagaatgagaat
gggaatgggaacgggaacgggagcgatggtgatgaatcgacagtgagcacggaggaaaac
agtggcggagaggtaaaaatggaggtgataagtaatggtggggtggaaacatcaggggaa
agggagagtaagctccgacaagacggatttatgctgtttaagaatttgtgtaaattgtca
atgaagttctcttcacaagagcattctggtgatgagattcttcttaggggaaagatccta
tctttggaattgctcaaagtgatcatggataatagtggtcttgtttggcgcaaaaatact
aactttcttaatattatcaaacagttcctctgcttgtcattactgaagaatagtgcacta
tcagtgatgaccatattccagctcctatgttctattttcatgagcttgttaactaagttt
agatcagggttgaaggctgagattggaatcttctttccaatgcttatccttcgtgtcctg
gagaatatactccagcctcgttttatacaaaaaatgactgtcctcaacctgctggagaag
atttctcaggatccgcagcttataattgatatttttgtcaactatgactgtgatcttgat
gctccaaacatttatgagaggacgattaatggccttttgaagactgctcttggtccacca
cctggttctactacaactttgcctccagttaaggatctcacattccgggttgaatcagta
aagtgtctagttagaatagttaagtcaatgggaacttggatggaccagcaactgaagata
gaggaatcttctttgtcctatagatcttctgtggcgtctggttctgttgatgtgcattct
accttaaacggagaggagggaacaattccagagtatgaactgcatgcggaaacaaattct
gagttgtctgatgctgctacttttgagcagcgtcgagcttataaaattgaaatgcagaag
ggcatcacattatttaacaggaaaccttcaaaaggtgtcgagtttttgattaacaccaaa
aaagttggtggttctccagaagaagttgctgcttttctaaagaatactgctggcctgaac
ccaactattattggggattacttgggagaacgagatgatttcccattaaaagttatgcat
gcatatgttgattcattttattttgaaaaaatggattttggtgaagctattcgatatttc
ttacggggtttcagattacctggagaggctcaaaagatagatcggattatggagaagttt
gctgagcgttactgtaaatgcaatcctaattcattcaaaactgcggatacagcttacgtc
cttgcctattctgttatattgcttaacacagatgctcacaataatatggttaaagagaag
atgaccaaagctgactttgttcggaacaaccgaggaattgatgatggcaaggacttacct
gaagagtatttgggttctctctatgatcaaattgttaaagatgaaatcaaaatgaatgct
gaaagttctcaaccacaaagcaagcaggtcaatggattcaacaggttactaggtttggac
ggtatactaaacttagtaatggggaagcaaccagaagaaaaacctttgggcacaaatagt
cttcttatcaagaacatccaagagcagttcaaggcaaagtctggaaaatcagagtcggtt
ttttatgcagtttctgatgtttcaatattgagatttatggtggaagtttgttggggtcct
atgctggctgcgtttagtatgacacttgatcagagtgatgacaaattagctacgacagaa
tgtttgcaaggcttccgatatgctgtacatgttactgcggtacttagtatgcagacacaa
agagatgcttttgtgacctctttggccaaattcacttatctccactgtgcagctgatatg
aagcaaaaaaatgttgatgctatgaagacaatgatgtccatagctattggagatggaaat
tatctacaagatgcatgggagcacatcttgacgtgtttgtctaggtttgaacatttacaa
cttttaggagaaggtgtaccaccagatgcatcattcttgagcatgtctaatgctgaacca
gagcagaaatcactaatgccaagtgacttggcttctctgaagaaaaagggggctcttcaa
aacccagctgtggccgctgtcgttcgaggtggatcctatgacagcagtgcacttggtgca
agctctcccaaactggttactccagaacaggtcactaactttatttcgaacttgcacttg
cttgatcaaattggaagttatgagttgaaccacatatttgcccatagccaaaggttgaac
agcgaggcaatagtatcttttgtgagagctctttgcaaagtttcaatggcagagttacag
tctccaacagatcctcgtgtgttcagtctcacaaagatagttgagattgcgcactataat
atgaatcgcatcagactagtgtggtctcgcatctggaatgttctctcagatttctttgtc
tctgttggcttgtctgaaaatctctcggtcgcaatttttgtcatggattctttgcgtcag
cttgctatgaagttccttgagcgcgaggagctggcaaattacaatttccaaaatgagttt
ttgaggccttttgtcattgtaatgcaaaagagtagctctgctgaaattcgagaacttatt
gtccgctgcatttctcagatggtccttacccgtgtcagtaatgtgaaatctggatggaaa
agtgtatttaaggtttttacaacagctgctgctgatgaacggaagagcatagtgttgttg
gcttttgagacaatggaaaaaattgttcgggaatattttccttacataactgagaccgag
tctacaactttcacagattgtgttagatgtctcataaccttcacaaacagtaaatttaat
agtgatgtcagcttcaatgccattgcgtttcttcgattttgtgctgttaagcttgcagaa
ggaggattgttttgcaatgaggatagccaagatgacagttcgtatgatttgagcgaaagt
ggggagactgctgataggcaatcttttactggcaaagatgaaaacacctctttctggatg
cctttgcttacaggattgtcaagattgacatctgatcctagatcaggcattagaaagagc
tctgttgaagtgctgtttaacatcctcatggatcatggtgaactattttcacggccgttt
tggagtgcaattttcaaatttgttgtctttccaatactcaatagtagaaacaaggatgat
aatatgctgcatgatgaccagtcacctgagtcttctaaagattcgtcagttagtgaaagt
ccatgggactctgaaacttcttcgttggcagcagagcgccttgttgatctttttgttaca
ttttttagtgttgtgagatctcaattacctgatgctgttactgtaatggctaattttatt
aagagtccaggccctggtccagctaaaacagggatagcagcgctggtacgtttgaccagt
gaattaggaaccagactttctgaagatgattggagaggaatgttgattgctattaaagat
gctgcagcatcaactcttccaggatttttgagggtgttcaggactatggataacattgat
attcctgatgccatggaaagttatcaaggacttgatatgtcttccgataatgaaatttcc
aacaatgacttggaggatgacaacatgcacactgctgtatacgtgatctcaagaatgaaa
agtcatattgctgttcagttggtcatcatacagcttgtgactgatctttacaggacacac
catgattgtctctcaacagctaacctcaagatccttcttgaacttttttcattgatttca
tcccatgccaaccaactaagccaggaaggtatcatactcgggaagcttcagacagtgtgt
aataggctagagctctctgagccacctgtggtgcattttgaaaacgaggcataccagagc
tatctgaacttcctcaatgacttgatgttggaaagattttccacatcagaggatctcgac
ttagaagcacaagttgtagccgtttgtgagaggatattagagatgtatgtggactgtgct
gggacttgctccaacaagaaggttgacagtgagcccaagacacattggatccttccattg
ctatcagtgaaaaaggaagaacttgcagcacgatctactttgcttttattagcattaaga
acattaagtcgtatggaaaaagattcattcaagaggtatatttcacgcttatttcccttg
ttggttgatcttgtgagaagcgaacatagctcaacagaagtattgccagttttgagtgac
atgtttctaacatgtataggccccataattgttggattttaa
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integrated database retrieval system
