Amaranthus tricolor (tampala): 130825748
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Entry
130825748 CDS
T09367
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130825748
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atri01002
]
130825748
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130825748
Enzymes [BR:
atri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130825748
Peptidases and inhibitors [BR:
atri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130825748
Ubiquitin system [BR:
atri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130825748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
130825748
NCBI-ProteinID:
XP_057547123
LinkDB
All DBs
Position
10:155554..162680
Genome browser
AA seq
1010 aa
AA seq
DB search
MGKRLKKKAARKEKDKEKRGFALSPKPIHEEDSQSSVVADDANVVQKDRRVCVHLENAVD
LECVLSNIESADSTCCEYCRESVKDRKPGKGKNKLGKKKGASESKATWVCLQCGKFLCGG
VGFPNSPQSHALRHVRQSRHPLVIQVENPHLRWCFSCSTLLAVEKAEDSAEQEDGLLDIV
KLLKKKFPKTPSVDVEDIWFGSGNVVSDVKSENKVVSVANGKDFNLIRGLVNLGNTCFFN
SVMQNLLAMNILREYLLKFEGSMGPLTNALKKIFVEISLEYGVKNVINPKSLFGSVCAKA
PQFRGGDQQDSHELLRYLLDGMSSEELYANKSKSSFPEQEKSPFASATFVDAIFGGQTSS
TVCCVECGHSSVVYEPFLDLSLPVPTKKPLSKKVQPVARTKKKLPPKRGGKARPKPSKNG
DVGIAPSCCNTSSSTCSSSGLKGNSLGCASSADLVEPSSVVHGNSKVTQGSDSNDADYVG
AQVPHRVSQDADDMSWLDFIEPVPQGDDRQKTDSLCWLDFVGPGLLSHDPSLAVECENFS
VTQDLRSEGGNYDTVSLQDTTMSSIEANLSQDSETNGDNFEDVFEPAKSSGEVSVHLRAV
NHNLESTVNACSLEHPLQVQSNAILLLTYKEDGTTEGEGLKIDKEISSSVVGYGEDTLGF
DGLGDLFNEPEVVETGVKNIQVGEHLGNGFLVGNNTESDPDEVDDTTSSVSVESCLAHFI
KPELLCGEHAWHCENCSKLFNERRGRMEKNRSETLTDISNDKCWSSEVLPASDDPIDSSN
VFLVNHNDVNIEMDEKLMNFDARPINGNGLNLPQGKEKICVPECADFSPAVSVGKSVDFH
CNNHLPDEGPSGLGEKHESREVEGVEVDLKCVKVMRDATKRILISKSPSILTIHLKRFRQ
DAVGRLNKLNGHVVFKEFLDVGPFMDYRSTERDNCIYRLIGVVVHSGTMRNGHYVAYVRG
NDRQRGRSEEENGEGHSVWYYASDACVRVTNLEEVLRCEAYILFYEKVKP
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaggttaaaaaagaaggcggctcgtaaagagaaggacaaagagaagcgtggt
tttgccctttctccaaaacccattcatgaagaagatagtcagagctctgtagttgccgat
gatgcgaacgtcgtgcagaaggaccggagagtttgtgtccatcttgagaatgctgttgat
ctcgagtgcgtcttatccaatattgaatctgccgactctacttgctgtgagtattgcaga
gagagcgtcaaagaccggaagcctggtaaagggaagaataaattgggtaagaagaagggc
gcttcagaatctaaagccacgtgggtttgtttacaatgtggaaaatttttgtgtggaggt
gttggctttccaaatagccctcaaagtcatgcgcttagacatgtgagacagagtcgccat
cctctggtgattcaagtagaaaatcctcatttaagatggtgtttttcttgcagcacactt
cttgctgtggagaaagccgaggattcagctgagcaggaagacggtttgttggatattgtc
aaattattgaaaaagaaatttccaaaaacgccttcagttgatgtggaagatatctggttt
ggaagtggaaatgttgtcagtgatgtaaaatcggaaaacaaagtagtcagtgtggcgaat
ggtaaagatttcaatttgattagagggttggtgaatctcgggaacacctgtttttttaat
tctgtcatgcagaatcttctggcaatgaatatattacgggaatatttactgaaatttgag
gggtccatgggtccgttgacgaatgctttaaagaaaatttttgttgaaattagccttgag
tacggtgttaaaaacgttataaaccccaaatcactatttggatctgtttgcgcaaaagct
cctcagtttaggggaggtgaccaacaagatagtcatgaattgctgcgttatttgcttgat
gggatgtcctctgaagagttgtatgcaaacaaatcaaaaagttctttccctgaacaagaa
aaatctccttttgcaagtgcaacatttgtggatgccatatttgggggacaaacatcaagc
actgtctgctgtgttgaatgtgggcattcttcagtggtgtatgagcctttcctggacctg
tcccttcctgtgccaacaaagaaacctctctcaaagaaggttcaaccagtggctcgcacg
aagaaaaagctgcctcccaaaagagggggtaaagctcgccctaaaccgagtaaaaatgga
gatgtggggattgctcctagttgctgcaacacttcaagcagcacttgttcttcctcgggt
ttgaagggtaattctctaggctgtgcttcatcagcagaccttgttgaacccagtagtgtg
gtacatggaaattcaaaggtgactcagggtagtgactccaatgatgctgactatgttggt
gctcaagtgccacatcgtgtttctcaggatgctgatgatatgtcatggttggattttata
gaaccagtgcctcaaggagatgatcgccaaaaaactgatagcttgtgttggttggatttt
gttggacctggattgttgtcacatgatcccagtttggctgttgagtgtgagaatttttct
gttactcaagatcttagaagcgagggtggcaattacgacactgtttctttgcaagataca
actatgtcaagtattgaagctaatttgtcacaagattctgaaacaaatggtgacaatttc
gaagatgtttttgagcctgccaagtcgagtggtgaagttagtgtgcaccttagggctgtg
aatcataatttggaatccacagttaatgcctgctctttagagcatccattgcaggtgcag
agcaatgcaatactgttgcttacctacaaggaagatggtacaactgaaggggaagggttg
aagatagataaggaaatctcttcatcagttgtaggttatggagaagatactttgggtttt
gatggccttggtgatttgttcaatgagcctgaggttgtcgagacaggtgtgaaaaatatc
caggtaggtgaacatttggggaatggctttctagtggggaacaataccgagtctgatcca
gatgaggttgatgatacaacttcatcagtatctgtggagagttgtttagcacatttcata
aagcctgagcttctgtgtggtgagcatgcttggcattgcgaaaattgttcaaaacttttt
aatgagcgaagggggagaatggagaaaaaccggtcagaaaccttgacagacatatccaat
gacaaatgttggagctctgaagttttgccagcaagtgatgatcctatagattcctcaaat
gtctttttggttaatcataacgatgttaacattgagatggatgagaaactgatgaatttt
gatgctaggccaataaatggcaatggtctaaatttgccacaagggaaagaaaaaatatgt
gtgccagaatgtgcagattttagtccagctgtttccgttggtaaatctgttgatttccat
tgtaataatcatttgcctgatgaagggccttctggacttggtgagaaacatgaatcaaga
gaagttgagggagtggaagttgatttgaagtgtgttaaggtaatgagagacgctactaaa
cgaatacttatcagcaagagtccttcaattttgactattcacttaaaacgatttcgacaa
gatgctgttggccgtctaaataaactgaatggccatgttgtctttaaggaatttcttgac
gttggaccttttatggattacaggtccacagagagagacaattgcatttatcgtttgatt
ggagtggtggtgcattccggaacaatgagaaatgggcattatgtggcgtatgtacgagga
aatgataggcaaagaggaagatcagaagaagaaaatggagagggtcattctgtatggtat
tatgcgagtgatgcatgtgttcgtgtaacaaatttggaggaggttctccgctgtgaagct
tacattctgttttacgagaaagtgaagccttga
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