Amaranthus tricolor (tampala): 130825852
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Entry
130825852 CDS
T09367
Name
(RefSeq) serine hydroxymethyltransferase 4
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00260
Glycine, serine and threonine metabolism
atri00460
Cyanoamino acid metabolism
atri00630
Glyoxylate and dicarboxylate metabolism
atri00670
One carbon pool by folate
atri01100
Metabolic pathways
atri01110
Biosynthesis of secondary metabolites
atri01200
Carbon metabolism
atri01230
Biosynthesis of amino acids
atri01240
Biosynthesis of cofactors
Module
atri_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
130825852
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
130825852
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
130825852
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
130825852
Enzymes [BR:
atri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
130825852
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Motif
Pfam:
SHMT
BRCA2
Motif
Other DBs
NCBI-GeneID:
130825852
NCBI-ProteinID:
XP_057547277
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Position
10:complement(359722..364420)
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AA seq
471 aa
AA seq
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MDPVNVWGNSSLEEVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIQALGSALTNKYS
EGMPGNRYYGGNEHIDVIENLCRSRALECYRLDPEKWGVNVQPYSGSPANFAAYTAVLNP
HDRIMGLDLPSGGHLTHGYYTAGGKKISATSIYFESLPYKVNFQTGYIDYDKLEEKAMDF
RPKMIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAASPFEYCDIVTT
TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFAVFPSLQGGPHNHQIGALA
VALKQAMSPGFKAYAKQVRANAVAIGNYLMSKGYSIVTSGTENHLVLWDLRPLGLTGNKV
EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEQIGEFLHRAVTITL
NIQKEFGKLLKDFNKGLVNNKEIETLKADVEKFASSYDMPGFLMSELKYKD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgttaatgtttggggaaactcttcccttgaagaggtagacccagaaatccat
gaccttattgagaaggaaaaacgtcgccaatgtagaggaattgagctgattgcctctgaa
aatttcacatcatttgctgttattcaagctttaggaagtgctcttaccaataaatactca
gagggtatgcctggaaatcgttattatggtggtaatgagcatatagatgtaattgaaaac
ttgtgtagatcaagggcattagaatgttacagacttgatccagagaaatggggtgttaat
gtacaaccatattctggaagtcctgcaaattttgctgcatatactgcagttttaaaccca
catgatagaattatgggacttgatctaccatcaggtgggcatttaacacatggatattat
actgctggtgggaaaaaaatttctgcaacatcaatttactttgaaagtttgccttataag
gtgaattttcaaactgggtacattgattatgataagctagaggagaaagctatggatttt
aggccaaaaatgatcatttgtggtggaagtgcttaccctagggattgggattatgctcgt
tttagggctattgctgataagtgtggtgcccttttgctatgtgatatggctcacattagt
ggccttgttgctgctcaggaagctgcaagtccttttgagtattgtgacattgttacaaca
actactcacaagagtcttagaggtccaagggctggcatgatcttctaccgcaagggtccg
aaaccaccaaagaagggccaacccgaggatgctgtgtacgactttgaagacaagatcaac
tttgccgttttcccctcccttcaaggtggtcctcacaaccaccagattggagcattggcg
gttgctctgaaacaggcaatgtctcccgggtttaaggcctatgcaaagcaagttagggca
aatgctgttgcgattggaaattatctgatgagcaaaggttacagcattgttactagcgga
actgagaaccaccttgtcctttgggatcttcgtcctctaggattgacaggaaacaaggtg
gagaagctatgtgatctttgcaacatcactgttaacaagaatgctgtttttggtgacagc
agtgctttggctcccggaggtgttcgaattggtacccctgccatgacatcaagagggttg
gtcgagaaggatttcgagcagatcggtgagtttctccatagagccgtcaccatcacattg
aacatccaaaaggagtttggtaaactcctcaaggacttcaacaaaggtttggtgaacaac
aaggagattgaaacactcaaggccgatgtcgagaaattcgcatcctcatatgacatgcct
ggtttcttgatgtctgagttaaagtacaaggactaa
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