Amaranthus tricolor (tampala): 130825873
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Entry
130825873 CDS
T09367
Name
(RefSeq) 25.3 kDa vesicle transport protein SEC22-1
KO
K08517
vesicle transport protein SEC22
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04130
SNARE interactions in vesicular transport
atri04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130825873
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130825873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130825873
Membrane trafficking [BR:
atri04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
130825873
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Gene cluster
GFIT
Motif
Pfam:
Longin
DUF7669
SelP_N
Motif
Other DBs
NCBI-GeneID:
130825873
NCBI-ProteinID:
XP_057547305
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All DBs
Position
10:16108167..16109891
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AA seq
213 aa
AA seq
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MVKLTIIGRIRDGLPLAQGLRYANEDYNNTPFYKQYIEFILKEISRGSLTPNPKMTIRLD
HQHSFNCLVACGVCFITLCDSSYPRILAFHYLEELRQELEKFSSEELIEKISRPYSFVKF
GSVITSIRKQYIDTRTQANLKKLNASHGHELNILIESISTIVENRKQMDYMERVVMAPQV
VSPIWGSKRLEVYLNGVLASISSILIYLLSTLY
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggttaagctaaccataattggaaggattagagatgggttgccattagcacaaggttta
aggtatgctaatgaagattacaacaacacaccattttacaagcaatatattgaattcatc
ctcaaagagatttcaaggggctctttaacacctaatccaaagatgactattcgtctagat
catcaacattcattcaattgtttggttgcttgtggtgtttgcttcatcacattatgtgac
tcttcatatccgagaatacttgctttccattaccttgaagaattgaggcaagaattggag
aagttttcaagtgaagaacttattgaaaaaatttcaagaccatatagttttgtcaagttt
ggcagtgttattaccagtattaggaagcaatacatagacacaagaacacaagctaatctc
aagaagttaaatgctagtcatgggcatgagttgaacatcttaatagaaagcatatctact
attgtagaaaacaggaaacaaatggattatatggagagagttgtgatggctcctcaagtt
gtttcacctatttggggctctaagcgtcttgaggtatacttaaatggagtattagcaagc
atttcttcaatactaatttatctattatccacactatattga
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