Amaranthus tricolor (tampala): 130825882
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Entry
130825882 CDS
T09367
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atri03036
]
130825882
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
atri04812
]
130825882
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
130825882
Microtubules and associated factors
gamma-tubulin ring complex
130825882
Cytoskeleton proteins [BR:
atri04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
130825882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
WD40_RFWD3
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_DCAF12
WD40_like
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
130825882
NCBI-ProteinID:
XP_057547316
LinkDB
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Position
10:4435711..4444851
Genome browser
AA seq
756 aa
AA seq
DB search
MKFAEMELLAASAGDTVKLFDLSVTSGDPCTLSYTPSPGFQVNSVKWNHTNLVIASAGDD
KKITLWQKNGQSMGTIPLTGSESGDNVEEAISSINFSNKSSRYLCSGGSGKVVRIWDLQR
KRCIKWLRGHTGSISSAMYNCKDEHLASVSLDGNLIVHNLVSGAKATELKDPHGQVLRVL
DYSWVSRSLLATAGDDGSVHLWDATAKSQSPKVSWLKQHSAPTAGLSFSPSNDKVIATVG
LDKKLYTFDSGVKRSLFCTSYEAPFSSLAFREDGLILAAGTSNGRVVFYDVRGKPQPFTV
LRAYGSSEAVTSLCWQRSKSIAVNEKNCSADVALLGGAVEDSVLMPDPLPSATLSNVSQT
ALSGPRRSTSAVESTFAAIGAGSSTNNSLSSLEETPHRSSLWTGGSLPRLHPTRIMNFKD
DMEVFSPLVDVQPITPSRDKLWHDPDGSRKDLLGDRKSSPTFPNRKFPLSENVTDKHSIF
DWKPDSASKQDDIHTAVLGSTPIASSRSDDSSSITPPEAWGGERLSDKLAHARQLVSQST
RFSIPTTSSSTSTSMFSGLQDISSGQENSPGTFGHVPFSAFSRNLGSKIVPGQANSEAIG
SSYLNPPRKFTYAERISTSAALGSPKTKKTGSETREELQNSLLARSDTTHAVESGLPPSV
NGAPNIHPRTPQADLHQGSSNFTLQLFQHTLQETLLSFQKSIHEDIRNLHIEILRQFHMQ
ETEMSGFMNSVTDRLDSLTREVQDLKKEHEKLRQLL
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgcggaaatggaattgttagcggcaagtgcaggtgacaccgttaagcttttc
gatctctccgttacgtcaggcgatccttgcactctcagttatactccatcgccgggtttt
caagttaattccgtcaaatggaaccataccaatttggtaattgcaagtgctggtgatgac
aaaaagataaccttgtggcaaaaaaatgggcagagtatggggactattcctcttacaggc
tctgaatccggggacaatgttgaggaggctatatcatccataaacttcagcaacaaaagc
tctagatacttgtgttctggaggaagtggtaaagttgtgaggatatgggacttacaaagg
aagcgttgtatcaaatggttgagaggtcacactggctcaatatcgagtgcaatgtataat
tgcaaggatgagcacttggcctccgttagtttggatgggaatcttattgttcacaacctt
gtctctggtgctaaagctactgaattgaaggatcctcatggacaggtgttaagagttctt
gattattcatgggttagccgctctctcttggctacagctggtgacgacggctctgtgcat
ttgtgggatgcaactgctaaaagtcaaagtccaaaggtctcttggttaaagcagcattca
gcaccaactgctgggcttagcttctctccttcaaatgataaggtaattgctactgttggt
ctcgataaaaagctgtatactttcgactcaggtgtgaaacggtccctgttttgcacttct
tatgaagcccccttttcttcattggcttttagagaagatggcttgatattggctgctgga
acaagcaatggccgtgtggtattttatgacgtacgtggaaagcctcaacctttcaccgtt
cttcgtgcttatggaagttctgaggctgtcacaagtttatgctggcaaagatcaaaatct
atagctgtcaatgagaaaaattgttcagccgatgttgctctattagggggagctgttgag
gattcagttttaatgcctgacccacttccttcagcaacattatccaatgtttcacaaaca
gctttgtctggtccacggcgctcgacctctgctgtcgaatcaaccttcgctgcaattggt
gctggatcatcaacaaacaatagtttgtcatctttagaggaaacgcctcatagaagttca
ttgtggacaggtggatctttgccaagattgcatccaactcgtattatgaatttcaaggat
gacatggaggttttctccccactagtggatgttcagcctattacgccttcacgtgataag
ctatggcatgaccctgatggttccagaaaagatctgcttggagatagaaaatcttctcca
acatttcccaatcggaagtttccactctcagaaaatgtcactgataaacattctatattt
gactggaaacctgattcagcttctaaacaggatgacatccatacagcggttttaggttcc
actcctattgcttcttccagaagtgacgattcttcatctattactcctccagaagcttgg
ggtggtgagagactatcagataaattagctcatgctcgtcagctggtatcccagtccaca
cgtttcagtataccaacaacatctagcagtacttcgacttcaatgttcagtggattgcaa
gatatatcatctggccaagaaaattcacctggaacgtttggacatgttccctttagtgca
ttttctcggaatcttggctcaaaaattgtccctggccaggcaaattctgaagctattgga
tcgtcatatttgaatccacctagaaaatttacctatgctgagagaataagcacatctgcg
gcattaggttctcctaaaacgaagaaaaccggatctgaaacaagagaagaacttcaaaat
agtttattggccagatctgatactacacatgctgttgaatcaggattgccgccgtcagtt
aatggagcaccaaatatacacccgagaacgcctcaggctgacttgcatcagggatcctct
aacttcacccttcaattgtttcaacatacacttcaagaaactctattgtctttccaaaaa
tcaattcatgaagacataaggaacctccacattgaaatcttaagacaatttcatatgcag
gagacagaaatgtcgggttttatgaattcggtaacagatagactagattcacttacgcga
gaagttcaggatttgaagaaagaacatgaaaagcttcgccaattgctttga
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