Amaranthus tricolor (tampala): 130825918
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Entry
130825918 CDS
T09367
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Module
atri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130825918
Enzymes [BR:
atri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130825918
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
130825918
NCBI-ProteinID:
XP_057547357
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Position
10:complement(2188786..2196509)
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AA seq
425 aa
AA seq
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MALQIHPIFSLLIIFSLCNFSSCYGRNVHFFHNKIQEYNNHLSYFNNMFNVDDFGAKGDG
SSDDTQAFKKAWKKACATSGAVLLVPSNKNYLLKPITFSGPCNTALTIEISGSILASADQ
SDYQKNTRRWLVFDGIDNLSVQGNGVIDGNGKIWWENSCKINKKKPCKHAPTALEFSRCK
NLVVKELNIQNAQQMHVTFNSCNYVKASSLKVAAPGNSPNTDGIHITNTQNIDVTNTFIG
TGDDCISIEDGSHSVRATNITCGPGHGISIGSLGDNNSEAHVSDIIVDGATLSNTTNGLR
IKTWQGGSGVASNIIFRNIKLSNVDNPIIIDQNYCDQDEPCKKQESAVQVKDVVYENIAG
TSSSEKAVIFNCSEKYPCEDITMENIKINSCEGDKIAEATCNNVQLNKMIDVSPQCSATY
SRSLF
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccctacaaattcatcccatattctcccttctcattattttttccttgtgtaatttt
tcctcatgttatggaagaaacgtgcattttttccataacaaaattcaagaatataataat
catttgtcttactttaataatatgttcaatgtagatgattttggagctaagggagatgga
agctccgatgatactcaggcatttaaaaaagcttggaaaaaagcttgcgcaacttcaggt
gctgtgttgttggtaccaagcaacaaaaactatcttctaaagccaattactttctcaggc
ccatgcaatactgctttaactatagagatatctggaagcatcttagcgtcagcagatcag
tcagattatcaaaaaaatacaaggcgttggttagtttttgacggaattgacaatttatca
gtccaaggcaatggtgttattgacggtaatggcaagatatggtgggaaaactcatgtaaa
atcaataaaaagaagccctgcaaacatgcgccaacagctctagaattttctagatgcaaa
aatttggtagtgaaggagttgaatatccaaaatgcgcagcaaatgcatgtaacatttaat
agttgcaattacgttaaagcttcaagtcttaaagtggctgctccagggaatagccctaat
actgatggcatacatataacaaacacccaaaatattgatgttacaaacacttttatcgga
acaggtgatgattgcatttctattgaggatgggtctcattcagttcgagctacaaacatt
acctgtggacctggccatggtatcagtattggaagcctgggtgacaacaattctgaagct
catgtttcagatataattgtagatggagctacactttctaatactactaatggactaaga
attaagacttggcagggaggatcaggagttgcaagtaacatcatattcagaaacataaag
ttgtccaatgtagacaaccccataattatagaccaaaactactgcgaccaagatgaaccg
tgcaaaaaacaggaatctgcggtacaagtgaaagatgtggtgtacgaaaacatagcagga
acgagttcatcagaaaaggcagttatatttaattgcagtgaaaaatatccatgtgaagat
attacaatggagaatattaagattaatagttgtgaaggtgacaaaattgctgaagctacg
tgtaataatgtacaattgaacaagatgattgatgtttctcctcaatgctcagctacttat
tcaagatcattattttag
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