Amaranthus tricolor (tampala): 130825955
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Entry
130825955 CDS
T09367
Name
(RefSeq) DNA polymerase delta small subunit isoform X1
KO
K02328
DNA polymerase delta subunit 2
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03030
DNA replication
atri03410
Base excision repair
atri03420
Nucleotide excision repair
atri03430
Mismatch repair
atri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130825955
03410 Base excision repair
130825955
03420 Nucleotide excision repair
130825955
03430 Mismatch repair
130825955
03440 Homologous recombination
130825955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atri03032
]
130825955
03400 DNA repair and recombination proteins [BR:
atri03400
]
130825955
DNA replication proteins [BR:
atri03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
130825955
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
130825955
MMR (mismatch excision repair)
DNA polymerase delta complex
130825955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
130825955
NCBI-ProteinID:
XP_057547392
LinkDB
All DBs
Position
10:complement(2844182..2853942)
Genome browser
AA seq
441 aa
AA seq
DB search
MEIDGENTLQRKHSHYQNLDEVFIVQNEVYRGQQYSQIYFARLHMMRTILHSLIPHWKPH
IPVVTILGLEEGKECVLVGTLYKHMKLKPGILDEYAKVRTVVPIVQPHNFMHADDYLVLE
DESGRVKLEGAALVPSVYVTGVVAAFLGKESTAGSFLVQEILEAGLPPQIEKPLKLDDDK
YVVFISGLSVGNSTSNPLQLQLLVDHITGHLGDEKEQRIAAEIVHVVIAGNSLEFSRGLF
DGQCLQNGLKDLSKLSEPFKELDIFLTQIAAGVSLDILPGPSDPANFSLPQQPLNRCLFP
GSSVYNTFRSCTNPHSFELDRIRFLGTSGQNIDDLEKYSEAKDKLEFMERTLRWRHLAPT
TPNTLGCYPFTDRDPFVIESSPHVYFVGNQDKYESRLVKGPEGQIARLITIPKFCETGVA
VGLNLRNLECHALSFGTQFSL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgacggcgagaacaccttacagcgaaagcattcccactaccaaaacttggac
gaagtgtttatagtacagaatgaggtgtataggggacaacagtacagtcaaatttacttt
gctcggcttcatatgatgagaactatcctccattctcttattcctcattggaaaccccat
attcctgtggtcactattttgggacttgaagagggcaaggaatgtgttcttgttggaacg
ctctacaagcatatgaaactcaaacccggtattcttgatgagtatgctaaagttaggact
gtggttcctattgttcagcctcacaactttatgcatgctgatgactatctggttctcgag
gatgaaagcgggagagttaaactcgagggagctgcacttgtaccttctgtttatgtgaca
ggggttgtagctgcattccttggaaaagaaagcacagctgggtcatttcttgttcaagag
atcctagaagctggcctaccaccccagatagagaagcctctaaagcttgatgatgacaag
tatgttgtctttatatctggactaagtgtgggcaacagcacctcaaaccctctccagtta
cagctgcttgtagaccacataactggccatttaggggatgaaaaggaacaaagaattgca
gcggagatagtccatgtagtaattgctggaaattccttagaattttccagaggactattt
gacggacagtgtctgcagaatggattgaaggatctgtctaagttgtctgagccatttaaa
gaactggatatcttcctgactcagattgctgctggtgtatctttggatatcttgcctgga
ccaagtgaccctgccaatttttctctaccgcagcagcctctaaatagatgcctctttcct
ggatcttcagtttataacactttcaggtcttgtactaatcctcattccttcgagcttgac
agaatcagatttctggggacatcaggacagaatattgatgatctggaaaagtattcagaa
gctaaagataaacttgagtttatggaaaggacgctgagatggaggcatcttgcgccaacc
acaccaaacactctaggatgttatccatttacagacagagatccttttgtaattgagagt
tctccgcatgtttactttgttggcaatcaggataagtatgaaagccgattagtaaaagga
cccgaagggcaaatagcacgacttatcaccattcctaaattttgtgagacaggagttgct
gttgggcttaatttgagaaatctggaatgccatgctctgagttttggaactcaattcagc
ttgtaa
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