Amaranthus tricolor (tampala): 130826234
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Entry
130826234 CDS
T09367
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130826234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130826234
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
130826234
Prokaryotic type
Archaeal type
TFB
130826234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
RB_B
HTH_Tnp_ISL3
DUF7573
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
130826234
NCBI-ProteinID:
XP_057547802
LinkDB
All DBs
Position
10:complement(2001522..2008212)
Genome browser
AA seq
312 aa
AA seq
DB search
MGDAYCTDCKKHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESNDNDPVRVG
GPTNPLLTDGGLSTVISKPNGTTGDYLSSSLGRWQNRGANPDRGLILAFKTIATMADRLG
LVSTIKDRASEIFKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLEVEMGQAVDMGTIHAGDFLRRFCSNLGMNNQAMKAAQEAVKKSEEI
DIRRSPISIAAAVIYIVTQLSEQKKPLRDISLATGVAEGTIRNAYKDLYPHISKIIPTWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgcatattgtaccgattgtaagaaacacacagaagttgtgttcgatcactcg
gccggtgacacagtatgttctgagtgcggactcgttctcgaatcgcactccattgatgaa
acttccgaatggagaactttcgctaatgaatcgaatgataatgacccggttcgtgttggt
gggccgactaaccctttacttaccgatggtgggctttctactgtgatatccaagcccaat
ggtactactggcgattatctttcatcatcgttaggccggtggcagaatcgaggtgctaac
cctgatcgtgggcttattcttgctttcaagaccattgctactatggctgataggttgggc
cttgtgtcaaccataaaggatagagctagtgagatattcaagaaagtggaagatcagaag
tcgagtaggggaagaaatcaagatgcaatattagctgcatgtctgtacatagcttgtcgg
caagaggacaaacctcggactgtaaaagaaatttgttctgttgccaatggtgcgacgaaa
aaagagattggtcgtgctaaagagtacattgtaaaacagctggaggttgaaatggggcaa
gcagtagacatgggaacaattcatgctggagacttcctgagacgtttttgttcaaatctt
ggtatgaacaatcaagccatgaaggctgcacaggaagctgtgaaaaaatccgaagaaatt
gatataaggagaagtcccatatccattgcagctgcagttatttatatcgtcactcaactt
tcagagcaaaagaaaccccttcgagatatatcacttgctactggtgttgctgaaggaacg
atcagaaatgcttataaggatctttatcctcacatttctaaaattattcccacttggtat
gccaaggaggaggacctgaaaaatctgtgcagtccatag
DBGET
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