Amaranthus tricolor (tampala): 130826322
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Entry
130826322 CDS
T09367
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130826322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130826322
03036 Chromosome and associated proteins [BR:
atri03036
]
130826322
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130826322
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130826322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
130826322
NCBI-ProteinID:
XP_057547925
LinkDB
All DBs
Position
10:complement(11246849..11268260)
Genome browser
AA seq
1024 aa
AA seq
DB search
MFGSSSPFGQSPSASFGTQSPFGQSNPNSNPFAPSPFGATNPFGSQTGGSMFGNTSTGVF
GQSSSPLSSTPVFGSTASTGFGSSNPAFGSSSSAFGGSFGQKPAFGGFGSNTQTSPFGSS
FQQSQPSFSSNVFGGTSPFGASTQPSFGGNSSPAFGSSSTPSFGAATAPTFGVNSAPAFG
STPSPAFGSTGAAFGVSTTPAFGSGGGFGSASTSVFGAGSGAAFGATTTPAFGAASTPAF
GAASTPAFGATSSPTFGVNSAPAFGASTPAFGANTSTPTFGTPNASTSSFTFSSSPAFGQ
TTSTFGSTGFGSTQSPFGASSSPFGASISSTFGGAVGQSNMGGSRIAPYQPSPEVDGSNS
STGGPGKLESISAMPIYKDKSHEELRWEDYQRNDKGGPSPTGQSIPGMNFGASPSTVQSS
PFGTPTFGQTSTNPFGTPAAGQSNPFGSKPSVFGSTTTSTFGSSLFGSVTTPSTFGSTPT
PTPSLFGASTPGFGSGSTPSLFSTGSSSAIGSSSIFGSAPAQGATTNFGSTLSFGNSQPS
SLFQSSPSLGIGNSFGQTSSAPGQTSGFGQNPFNNASGFGSNIFSSTTTSQFGFPQTTPS
LSTSFQPSFPTQTASGFNISTFGQTPSGLSSGLGASNLFAQGLGQTSFNQISAVAQPVAV
TNPFGTLPAMPHMSIGNAGTSPSIQYGISSMPVVDKPTPVRISSFLTSRHLSQRRIRLPA
RKYHPKNDGSRVPFFNDDDEAPSTPKADALFVPRENPRALVIRPINQWTKSSKKETCVLV
HENGKTSEEIEHTQNGSTSERNGSIANGNGLTKERSHPIKINQKSADDDTMNHKGNSCIP
LSGHRAGEAAIVYEHGADIEAMMPKLRHSDYYTEPRIQELAAKERAEPGFCRHVKDFVVG
RHGFGSIRFLGETDVRRLDLESLIQFNNREVIVYMDESKKPLVGQGLNKPAEVTLLNIKC
YDKKTGNQIVDGPRIEKYKEILKKKAEEQEAEFLSYDPAKGEWKFRVKHFSKYMLCDDDN
WDID
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctcaagtagcccttttgggcaatcacctagtgcatcctttggaacgcagtcc
cctttcgggcaaagcaatccaaacagtaatccttttgctccaagcccttttggtgctacc
aacccttttggttcacaaacaggaggttcaatgtttggcaacacctcaactggtgtgttt
ggtcaatcatcatcacccttgtcttcaacaccagtgtttggttctactgcatcaactggg
tttgggagctccaatcctgcttttggaagctcttcttcagcttttggaggttcttttggc
cagaagcctgcttttggaggttttgggtccaatactcaaacaagtccctttggaagctca
tttcaacaatcacagccttcatttagcagcaatgtatttggtggtacatcaccattcggt
gcatcaacccaaccttcattcggtggtaacagctcccctgcttttggatcatcaagtaca
ccctcatttggcgctgcaactgctccaacatttggagtcaatagtgctcctgctttcggt
tcaacaccaagtccagcttttggaagcacgggagcggcctttggtgtctcaactacacct
gcttttgggtctggaggaggttttggttctgcaagtacttctgtctttggagctggcagt
ggtgctgcatttggtgctacgaccacaccagcatttggtgctgcatccactccagccttt
ggtgctgcatccactccagcctttggtgctactagctctccgacatttggtgttaatagt
gcacctgcttttggagctagtacacctgcttttggtgctaatactagcactccaacattt
gggacaccaaatgccagtacctcatcttttactttttcttccagcccagcctttggtcag
actacatctacattcggtagcaccggtttcggatctacacaatccccatttggtgcatcg
tcctctccgtttggagcatcaatatcaagcacctttggtggtgctgttgggcagtcaaat
atgggaggaagtagaattgctccataccaaccgtccccagaagttgatggaagtaatagt
agcactggaggacctggaaagttggagtcaatatctgctatgccaatctacaaagacaaa
agccatgaagagctgaggtgggaggattaccagcgtaatgataaaggtggcccttctcca
actggacagtctataccagggatgaactttggtgcatctccatctaccgtgcagtccagt
ccttttggaacaccaacgtttgggcaaacatcaactaatccatttggaacaccagcagct
ggtcaatcgaacccatttggttcaaaaccttcagtatttggttctactactacctcgaca
tttggctcctcgcttttcggttctgttactacgccctccacttttggatcaactccaaca
ccaacaccttccctttttggagcatccactccaggatttggttcgggcagtactccatct
ctttttagtaccggtagctcttctgccattggatcgtcatctatatttggttctgcgcct
gctcagggtgccaccacaaattttggttccactttgagctttgggaattctcagccatcc
tctttatttcagtcgtccccatcgcttggaataggaaatagttttgggcaaactagttct
gccccaggacaaacttctggatttggtcaaaatccttttaataatgcatccggatttgga
tcaaatatattttcaagcaccactaccagtcaattcggctttcctcaaaccactccttct
ctttcaacttcttttcagcccagttttcccacgcagacagccagtggtttcaacattagt
accttcggacaaacaccgtcaggtttgagcagtggccttggtgcatcaaacctgtttgct
cagggtcttggtcaaacttctttcaatcagatctctgcagttgcacagccggttgcagtc
acaaatcctttcgggacccttccagcaatgcctcatatgtcaataggcaatgctggaacc
tcaccatctattcaatacggaatatctagcatgcctgttgttgataagcctacccctgta
agaatttcttcctttttaacatcacgacatttgtctcaaaggcgaatcaggctacctgca
aggaaataccatcctaaaaatgatggttcaagggttccttttttcaatgatgatgatgaa
gcacctagcacccccaaggcagatgctctatttgttccccgagaaaatcctagagctttg
gttattcggcccatcaatcagtggacgaaatcttcgaagaaggaaacttgcgtcttggtg
cacgaaaatggcaaaacgtctgaagaaattgagcatactcagaatggatctacttctgaa
agaaatggtagcattgccaatggaaatggattgaccaaggaacgaagccatcctataaaa
atcaaccagaaatctgctgatgatgatactatgaatcataaaggaaattcctgcattcca
ctttctggtcacagagctggtgaggcagcaattgtatatgagcatggggctgatatcgag
gcaatgatgccaaaacttcgacactctgattattacaccgagcctcggatccaagagctg
gccgccaaagaaagggccgaaccaggtttctgcaggcatgtgaaggattttgttgtggga
cggcatggtttcggaagcattaggttcctaggcgagactgatgtacgaaggcttgatctt
gagtccctaatccagttcaataaccgtgaggtgattgtttatatggatgagagtaagaaa
cctctggttggtcaaggtctcaacaagcctgctgaagtaactcttcttaacatcaaatgt
tacgataaaaaaactggaaaccagatcgtagatggaccaagaattgaaaaatacaaagag
atattgaagaaaaaagctgaggaacaagaggctgaatttttgtcctatgaccctgcaaaa
ggagagtggaaattcagggtcaagcacttcagcaaatatatgctttgcgatgatgataac
tgggatatcgattga
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