Amaranthus tricolor (tampala): 130826340
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Entry
130826340 CDS
T09367
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atri03000
]
130826340
04121 Ubiquitin system [BR:
atri04121
]
130826340
Transcription factors [BR:
atri03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
130826340
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
130826340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
130826340
NCBI-ProteinID:
XP_057547952
LinkDB
All DBs
Position
10:13953166..13961754
Genome browser
AA seq
1109 aa
AA seq
DB search
MSSRAQNDGGDRPRFSGQSSRQQWVPKGPGISSSPSSFNEYTGGYSGDENSRSEKMDNRR
GRGFRGGSGSGGNGGRSYMGRPQHLRRGKNEMREGGIVNRDRSNNKRKGGGIGVDADLPQ
LVQEIQDKLSRGIVECMICYDMVRRTAPIWSCSSCYSIFHLNCIKKWARAPTSIDTSAVK
SQGFNWRCPGCQAVQLTASKDIHYVCFCGKRHDPESDFYLTPHSCGEPCGKPLEKEVLGA
GLSKEVMCPHVCVLHCHPGPCLPCKAFAPPRPCPCGKKVITTRCSERKSVHTCGMVCNKI
LECGCHWCEQLCHVGPCKPCRAPMDASCFCKKKSEMVICGDMSLNGEISVENGVFSCSSS
CGKKLGCENHHCTEICHPGPCGECEFLPSKLKTCYCGKTPIGDQRRSCLDPIPTCSGTCG
KLLPCGKHYCKDKCHSKLCPHCTEIVAQKCRCGSTSRTVECYKTTLASETFVCDRPCRRK
KNCGRHRCSERCCPLSDSSSTVSDGGNPHFCSMPCGKKLKCGQHSCEAFCHCGHCPPCLE
TIFTYLTCACGRTSIPPPLPCGTPLPSSCQYPCSVSQPCGHQSTHSCHFGECPPCSIPIM
KECIGGHVVLRNVPCGSKEITCNKLCGKPRRCGLHACARSCHLSPCDLSCEPSDPSEKPS
CGQVCGAPRRDCRHTCQAPCHPLAPCPDLCESPVTISCSCGRITTMVPCDSGGNTSTFNA
YAFEASVLQKLPAPLQPVEANETRVPLSHRKLMCDDECAKLEKKRVLADAFDISQPSIDA
LHFGDNPNASQVLSELLRRDPKWVFAVEERCKHLVLGKNRGGSSKIKVHVFCTMMKEKRD
AIRLIAERWKLFISAAGWEPKRFIVVHATAKSKAPPHILAPKGSAAVVALHPPVFDPLVD
MNPRLVVALLDLPSEADISTLVLRFGGECELVWLNDKNALAVFSEAVRAETAMRRLDNGS
VYHGASVVQQSSAAADAAPAPAPAWAGTTPSASRSNPWKKASTWAEDTWGEEEWTSGNVS
NDVKHSSSWKGRDAPATITMNRWTVLNPDSSSLRTTDSTTRVIDYSKTRAAVENTSASEA
CSEVKTAPQPDDNAEVVDDWEKAFDKVTL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcgagctcagaatgatggtggcgatcgtcctagattttctggccaaagtagt
cgtcagcaatgggttcctaaagggcctggaatttcgagttccccgtcaagttttaatgag
tataccggtggatattctggtgatgaaaacagtaggtcggagaaaatggataatagacgg
ggtcgagggtttagaggaggtagtggaagtggtggtaatggaggtcggagttatatgggt
cggcctcaacatttgaggagagggaagaacgaaatgagagaaggagggattgtaaatcgc
gatagaagtaacaataagagaaaggggggaggaattggggttgatgcagatttacctcag
ctggtgcaagagattcaggacaaattaagtagaggaattgtggaatgtatgatttgttat
gatatggtgaggaggacggctcctatttggtcttgctcgagctgttactctatcttccat
ttgaattgcatcaagaaatgggctcgtgcacctacttcgattgatacttctgctgtgaag
agtcaagggtttaattggcgatgtcctgggtgtcaggcagtgcagcttacagcatcaaag
gatattcattatgtttgcttttgtgggaagagacatgatccagaatctgatttttacttg
acaccccattcttgcggtgagccttgtggaaagccattagagaaggaggttcttggagct
ggtttgagcaaggaggttatgtgtcctcatgtttgtgttttacattgccatcctggtcct
tgtcttccatgcaaagcttttgctcctcctcggccttgtccttgtggcaagaaagtaatt
accacaagatgttctgagcgtaagtctgtgcacacttgtggtatggtctgcaataagatt
ctcgaatgtggatgccattggtgtgaacagctttgtcatgtgggtccatgtaagccatgc
cgggctcccatggatgcctcttgcttttgcaagaagaaatctgagatggttatttgtgga
gacatgtcattgaatggagagataagtgtggaaaatggtgttttctcttgtagttcttct
tgtggaaagaaattgggatgtgaaaatcatcattgtacagaaatttgtcatccaggccca
tgtggtgaatgtgaattcttgcctagcaaattaaaaacctgttattgtggtaagacacct
ataggggatcagcgaaggagttgtctagatccgatcccgacatgctcagggacttgtggg
aagctccttccttgtgggaagcactattgtaaagataagtgtcattctaaattgtgtcct
cattgcaccgagattgtcgcccaaaaatgtcgatgtggttcaacgtctcggacggtggaa
tgttataagacgactttagccagtgagacatttgtctgtgatcggccttgtaggcgtaag
aagaattgtggaaggcatcgttgcagtgagcgctgctgccccctttctgattctagcagc
actgtatctgatggcgggaatccgcacttctgctcaatgccatgtggtaagaagttgaaa
tgtgggcaacattcctgtgaagcattctgtcactgtggtcactgtcctccctgcttggaa
actatatttacttaccttacatgtgcttgtggaaggacttcaattccaccgcccctacct
tgtgggactcctcttccttcttcatgtcaatatccatgctctgtttctcaaccttgtggc
caccaatccactcacagttgccattttggagagtgcccaccttgctctattcccataatg
aaggaatgcattggtggtcatgtggttcttcgtaatgttccctgtgggtcaaaggagatt
acttgtaacaagctttgtggaaagccgaggcgatgtggactgcatgcgtgtgctaggagt
tgccacctgtcaccgtgtgatctgtcttgtgaaccttcagatccttctgagaagccttct
tgtggacaggtttgtggtgccccaagaagagactgtagacacacttgtcaagctccttgc
catcctttagctccttgtcctgacttatgtgagtccccagttacaatttcttgttcttgt
ggaagaattaccacaatggtgccttgtgattctgggggaaatacttccactttcaatgca
tatgcttttgaagcttctgttttacagaagttgccagcgccacttcagcctgtggaagca
aatgaaacaagagttccactaagtcataggaagcttatgtgtgacgatgaatgtgccaaa
ctcgagaaaaaacgggttcttgcagatgcttttgatatttctcagcctagtatagatgcc
ctccattttggtgataatccgaatgcttcacaagtgctatctgaattacttcgacgtgat
ccaaaatgggtttttgcggtggaggagagatgcaaacacttggtacttggtaaaaacaga
ggtggtagtagcaaaattaaggttcatgtattttgtacgatgatgaaggagaagcgagac
gcaattcgacttatagcagagagatggaaactctttattagtgctgctggttgggagcct
aaacgatttatagtggttcatgctactgcaaaatctaaagccccacctcacattctggca
cccaagggttcagctgcagtggtagcactccatccacctgtttttgatcctttggtggat
atgaatcctaggcttgttgttgccctgcttgatcttccgagtgaagcagacatcagcaca
ttggttttgcggtttggtggtgaatgtgagctcgtgtggttgaatgataagaatgccctt
gctgttttcagtgaagctgtccgagcagaaactgctatgagaaggttagataacggatct
gtttatcatggggcttctgtcgttcaacagagtagtgctgcagctgatgctgcacctgca
cctgcacctgcatgggcagggactacaccatctgcttcgagaagtaatccatggaagaag
gccagtacctgggctgaagacacatggggcgaggaagaatggactagtggtaatgtaagt
aatgatgtgaaacattcgtcgtcgtggaaaggacgtgatgccccagcgaccataacgatg
aacagatggactgttctgaatcccgactcttcatcattaagaacaactgattcgactacg
agggttattgattactcaaaaacaagggcagctgttgaaaacacctcagcctcagaagct
tgtagtgaagtgaagacagcacctcagcctgatgacaatgctgaagttgtggatgactgg
gaaaaggcttttgacaaagtaacattgtag
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