Amaranthus tricolor (tampala): 130826776
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Entry
130826776 CDS
T09367
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130826776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atri02000
]
130826776
04147 Exosome [BR:
atri04147
]
130826776
04090 CD molecules [BR:
atri04090
]
130826776
Enzymes [BR:
atri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
130826776
Transporters [BR:
atri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
130826776
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130826776
CD molecules [BR:
atri04090
]
Proteins
130826776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
ABC_ATPase
RsgA_GTPase
AAA_29
AAA
AAA_30
nSTAND1
AAA_25
DUF815
AAA_15
Rad17
PRK
DUF87
DUF4349
Motif
Other DBs
NCBI-GeneID:
130826776
NCBI-ProteinID:
XP_057548337
LinkDB
All DBs
Position
11:23889309..23900033
Genome browser
AA seq
1339 aa
AA seq
DB search
MSQNSKEIKTIEQWRWSEMQGIELLASNNSSSTTTENTLNLEKESKTLPQIEMEASEGKK
GGLEKPKEGPPAVAFKELFRFADGLDYILMGIGSLGAFVHGCSLPLFLRFFADLVNSFGS
YANNPDKMMQEVLKYAYYFLVVGAAIWASSWAEIACWMWTGERQSTKMRIKYLEAALSQD
IQYFDTQVRTSDIVFAINTDAALVQDAISEKLGSFIHYLATFVTGFVVGFTAVWQLALVT
LAVVPLIAIIGGIHTTTLAKLSSKSQGAMSQAGNIVEQTIVQIRVVFAFVGESRTLQAYS
DALKIAQRLGYKSGLAKGLGLGGTYFVVFCCYALLLWYGGYLVRHHLTNGGLAIATMFAV
MIGGIGLGQSVPSMSAFAKAKVAAAKIFMVIDHKPSIDRSKESGTEMESVTGQIELKNVD
FSYPSRPDVKILNNFSLIVPAGKTIALVGSSGSGKSTVVSLIERFYDPTQGQVVIDGHDI
KSMKLRWLRQQIGLVSQEPALFATSIKENILLGRPDASLVEVEEAARVANAHSFIIKLPN
GFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI
GRTTLVIAHRLSTIRKADLVAVLQQGSVSEVGTHDDLMIKGENSVYAKLIRMQEAAHETT
LNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDANHANYRLE
KLAFKEQANSFCRLAKMNAPEWPYALVGSIGSVICGSLSAFFAYVLSAVLSVYYNPDHAF
MIREIAKYCYLLIGLSSAALIFNTLQHFFWDVVGENLTKRVREKMMAALIKNEMAWFDQE
ENESARIAARLALDANNVRSAIGDRISVIMQNSALMLVACTAGFVLQWRLALVLIAVFPV
VVAATVLQKMFLKGFSGDLEAAHAKATQLAGEAVSNVRTVAAFNSEVKIVGLFSSNLETP
LRRCFWKGQIAGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANG
AAETLTLAPDFIKGGRAMKSVFELLDRKTEIEPDDPDATPVPERLRGEVELKHVDFSYPT
RPDISVFQDLNLRARAGKILALVGPSGCGKSSVISLVLRFYDPSSGRVLIDGKDIRKYNL
KSLRQHMALVPQEPCLFGTSIYDNIKYGNDKATETEIIEAATLANAHKFISSMPEGYKTQ
VGERGVQLSGGQKQRIALARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTI
VVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKTYPDGCYARMIQLQRFSHGQAIGVAS
GSTSAGRPREDDGRENRYP
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaattctaaggaaataaagacaattgaacaatggagatggtctgaaatgcaa
ggtattgagcttttagcttctaacaattcatcatcaacaactacagaaaatactctaaat
ttagagaaggaatcaaaaacattaccacaaatagaaatggaagcttctgaagggaaaaaa
ggaggattagagaagcctaaagaaggtcctcctgcagttgcattcaaagaattgtttaga
tttgctgatgggttggattatattttaatggggattggttctcttggagcttttgttcat
gggtgttctttgcctctttttcttagattttttgctgatcttgttaattcttttggttct
tatgctaataatcctgataaaatgatgcaagaagttttaaagtatgcatattattttctt
gttgttggagctgcaatttgggcatcttcatgggcagaaattgcttgttggatgtggacc
ggagaaagacaatcaacaaaaatgaggatcaagtacttagaagcagcattgagtcaggat
attcagtactttgatacacaagttagaacttctgatattgtttttgccattaacactgat
gctgcactagttcaagatgccataagtgagaagctgggtagtttcattcactatttagca
acatttgtgactggttttgtggtgggatttactgctgtatggcaattagctttagtaaca
ctagctgttgttcctctaattgctattattggtgggatccacactacaacattagctaaa
ctctctagtaagagccaaggagctatgtcacaagctgggaatattgttgaacagacaatc
gttcaaattcgagtagtcttcgcgtttgtgggtgaatcgaggactctacaagcttactcg
gacgcattgaaaatcgcccaaaggctcggttataagagtggattagcgaagggtttggga
ttgggtggaacgtattttgttgtcttttgttgttatgcacttcttctttggtacggagga
tatcttgttcgacaccatttaacgaatggaggtcttgccatagctactatgttcgcggtc
atgattggtggaataggtttaggacaatcagttccgagtatgagtgcgttcgccaaggca
aaagttgcagctgctaagatctttatggtaattgatcacaaaccgagtattgatcgaagc
aaagaatcaggcacggaaatggaatcggtaacagggcaaattgaactaaaaaatgtcgac
ttttcatatccatcccgaccagatgtgaaaattcttaacaatttctcacttattgtacct
gctgggaaaaccattgctctagttggtagtagtggatctggaaaaagcactgtggtttct
ctcattgagagattttatgatcccactcaaggacaagttgttatagatgggcatgacata
aaatcaatgaagcttagatggttgaggcagcaaatagggttggtgagccaagagcctgct
ttgtttgcaaccagcattaaagagaacatacttctaggaagaccagatgctagcttggtt
gaggttgaagaagctgctagagttgccaatgctcattcttttatcattaagctccctaat
ggctttgacactcaggtaggggagagaggcttgcagctctcgggaggacaaaaacaaaga
atcgcaatcgccagggcaatgcttaaaaacccggcaatactcctcttagatgaagcaacg
agtgcccttgactccgaatcagagaagcttgtccaagaggcacttgatcggtttatgatt
ggaaggacaactcttgtcattgctcaccgtctctccaccattcgcaaggccgatcttgtg
gctgtactgcagcagggaagtgtatctgaggtcggaacccatgatgacctcatgatcaaa
ggagaaaatagtgtgtacgccaagctcattcgcatgcaagaagctgctcatgaaaccacc
ttgaataacgcccgaaagagtagtgcaaggccttcaagtgccagaaactcggttagctca
ccaatcattgcacgaaattcgtcgtatgggcgctcaccttattcgcgtcgcctctctgat
ttctctacatccgatttcagtctctcccttgatgccaaccatgcaaattaccggcttgag
aaactggcattcaaagaacaagccaattccttttgccgtctagctaaaatgaacgctcct
gaatggccgtatgctttggttggttctataggctccgttatctgtggctcactcagcgca
ttctttgcctatgttcttagtgctgtccttagtgtttactataaccctgatcatgctttc
atgattagagaaatcgctaagtactgctatctactaatcggactttcatcggccgccctt
atcttcaacacgctgcaacatttcttctgggatgtggtcggtgagaatctgacgaaaagg
gtaagggagaaaatgatggcagctttgataaagaacgagatggcgtggtttgatcaggaa
gaaaacgagagtgcccgaatcgctgctaggctagctctcgatgccaataatgttcggtca
gctattggcgacagaatttcggttatcatgcagaattctgccctcatgcttgttgcttgt
actgctgggttcgttttgcaatggcgtcttgcccttgtactcatcgccgtcttcccagta
gttgttgctgcgactgttcttcagaaaatgttcctgaaaggtttctccggagatctagag
gctgcccatgccaaggctacacaactggctggcgaggctgtgtcaaacgtcagaactgtt
gctgctttcaactcagaagtgaaaattgtcggtctttttagcagtaaccttgaaactcct
ttacgacgatgcttctggaaggggcagattgcgggtagtggatatggaatcgctcagttt
gcgctttatgcttcctacgctctcggtctttggtatgcttcttggcttgttaagcatgga
atctctgatttctcgaaaacaatccgggttttcatggtccttatggtctcggccaatggt
gctgctgagaccttgacactggctcctgatttcatcaaggggggacgagcaatgaaatca
gtatttgagcttcttgatcgcaaaaccgagattgaacccgatgatccagatgctacaccg
gttcctgaacgtcttcgaggggaagtcgaactcaagcatgttgacttctcctatcccacc
cgtcctgatatatctgtctttcaagacctgaacttgcgagcacgagcagggaagatcctt
gcattagtgggtcctagcggttgtggtaaaagctcggttatttcccttgttcttagattc
tacgacccatcgtcaggaagggtgttgattgacggtaaagacatccgaaagtacaatcta
aagtctttgaggcagcacatggcattagtccctcaagaaccatgcctttttggcacttct
atttatgataacattaaatatggcaacgataaagcaaccgagacagagataatcgaagca
gcgaccctagctaatgcgcacaagtttatatcatccatgcccgagggttacaagacccaa
gtaggcgagaggggggttcaattgtccggagggcaaaagcagaggattgcactcgcaaga
gctttcgtgaggaaggccgaaataatgttgcttgatgaagctacaagtgcgcttgatgca
gagtccgagaggtcggttcaagaagccttggatcgcgcttgctcagggaagactacaatc
gtggtggcccacaggctatcgactatacgaaatgcccatgtcattgctgttatcgatgat
gggaaagtcgcggagcaaggttcgcattcacatctactaaagacctatccggatgggtgc
tatgcccgaatgatacagttgcaaagattctcacacggtcaggctatcggagtggcatca
ggatcaacttctgccggacgtcctagagaagatgatggaagagaaaatcgatatccttag
DBGET
integrated database retrieval system
