Amaranthus tricolor (tampala): 130827186
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Entry
130827186 CDS
T09367
Name
(RefSeq) syntaxin-42-like
KO
K08489
syntaxin 16
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130827186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130827186
Membrane trafficking [BR:
atri04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
130827186
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Prominin
Motif
Other DBs
NCBI-GeneID:
130827186
NCBI-ProteinID:
XP_057548823
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Position
11:23416388..23425559
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AA seq
324 aa
AA seq
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MATRNRTILFRKHRDAIKAVRTPDSSLMTGGHRGGVGGPVIEMTSLLNSNASSSSYTPLS
TNDPSTSRDALTDGLPPAWVDIAEEITANIQRARIKMAELVKAHSKALMPSFGDGRDDQR
RIEGLTLEITDILRRSEKRLKDLSLRGPSEDSGVRKNVQRSLATDLQNLSVELRKKQSTY
LKRLRQQKEGSDDIDVEMNLNGSMSKVENEYSDVGFDNYQVAEFKKSEHLTAEREREINQ
VVQSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVAASVEEGFKQLQKAERSQRQGGMV
RCATILIVMCFVMLVLLILKEILF
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgactagaaatcgtacaatactgttccgaaagcatagagatgcaatcaaagcagtt
cgaactccagattcatcgttaatgactggtggacacagaggtggagttggcggtcccgtc
attgaaatgacttcactccttaattctaacgcatcttcttcttcctatactcctctcagc
accaacgatccctctacatccagggatgcattgacagatggcctaccaccagcatgggtg
gacattgcagaagaaataacagcaaatatacagcgtgctcgaatcaaaatggcagagctg
gtgaaggctcattcaaaggctttaatgccatcctttggggatgggagagatgatcagcgt
cggattgagggtcttaccctagagattactgatatattgaggagatcagagaaaaggttg
aaagatctgtcactacgtggtccttcagaggattctggtgttcgtaaaaatgtacagcgt
tcccttgctacagatcttcagaacctttctgtagaacttcgtaagaaacagtcaacatat
ctaaaacggcttaggcaacagaaggaggggtctgatgacattgacgtggaaatgaattta
aatggaagcatgtcaaaagttgagaacgaatatagcgacgtgggttttgacaattatcaa
gtggctgagttcaagaaaagtgaacatttaacagcagaaagagagagagagattaaccag
gttgtgcagtctgtgaatgaacttgctcagatcatgaaagatctatcagttcttgtgatt
gaccagggcaccatagttgatcggatagactacaacatccagaacgttgctgcatcagtt
gaagagggctttaaacagcttcagaaagctgagagatcgcaaaggcaaggaggcatggta
cggtgtgcaacaattctcatcgtgatgtgctttgttatgttggtgcttctcatcctcaag
gagatactattctag
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