Amaranthus tricolor (tampala): 130827227
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Entry
130827227 CDS
T09367
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130827227
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atri01009
]
130827227
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130827227
03036 Chromosome and associated proteins [BR:
atri03036
]
130827227
Protein phosphatases and associated proteins [BR:
atri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
130827227
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
130827227
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
130827227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
130827227
NCBI-ProteinID:
XP_057548872
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All DBs
Position
11:25133405..25137920
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AA seq
494 aa
AA seq
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MLNKFMKRGNKKGSKSDDLAFPPANRGSGIVASSNVVVNHASRVGVPGSSGPTATPQGVG
GAAIVAPPPTGSVEALPLFKDVPAAERQNLFMRKLQICSFQFDFIDTLKSVREKEIKRQT
LMELIEFIQSGSGKIHETVQEEMIKMVSINIFRCLPPSSHENTGVEATDPEEEEPFLEPS
WPHLQLVYELLLRYVVSQDTDTKIAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIY
GKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRA
LIPLHKPKPVGLYHQQLSYCITQFVEKDYKLADTVIRGLLKYWPVTNCQKEVLFLGELEE
VLEATQCAEFQRCMIPLFRQIARCLNSPHFQVAERALFFWNNEHIVSLIAQNRNVILPII
FEALEKNIQSHWNQAVHGLTVNVRKMFLEMDVELFEDCQSQYEEKVSRAKDVEEQRLLTW
KRLAEVAGEDMVTA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgctgaataaatttatgaaacgagggaacaaaaaaggttcgaaatcagatgatttagcc
tttcctcctgctaatcgaggatctgggattgttgcttcttcaaatgttgttgttaatcac
gcttcaagagttggtgttccgggttcatccggcccaaccgctacaccacaaggcgtaggc
ggggcagccattgtagctcccccgcctacgggctcagtcgaggctcttcctctgttcaaa
gatgttccagctgcggaacgacaaaatctgttcatgagaaagctacaaatttgctcattc
caatttgatttcattgatacattgaaatcagttagggaaaaagaaatcaaacgacagaca
ttaatggaacttattgagtttatccaatctgggtccggaaaaatccatgaaactgttcaa
gaagaaatgattaagatggtttctataaacattttccgatgtttacctccatcatcccac
gaaaacaccggcgtcgaagcgactgacccagaagaagaggagccctttcttgagccatca
tggccacatttacagctagtgtatgaactcctattgagatatgttgtatcccaagatact
gacactaaaatcgccaaacgttacatagatcattcttttgtattgaagctattggatttg
tttgattcagaagatcctagagaaagggagtatttgaaaactatacttcataggatttat
gggaagtttatggtgcatagaccttttataaggaaagccattaacaatatattctatcgt
tttatctatgaaacagagagacacagtgggataggtgagcttttggagattcttggaagc
atcattaatggctttgctctgcccatgaaagaggagcataagttgttcctcgttcgagcg
ttgattcctcttcataaacccaaaccagttggtttatatcatcaacaattatcatattgc
attactcaatttgttgagaaagattacaaattggcagatactgtaattaggggtttgttg
aagtattggcctgttactaattgccagaaagaggttctttttcttggggagttagaagaa
gtattggaagcaacacagtgtgctgaatttcagcgatgtatgatccctctttttcgacag
attgcccgttgcctaaatagtcctcactttcaggtagctgaacgagcgcttttcttttgg
aacaacgagcatatagttagtttaatcgcccaaaaccggaatgtcatactgcccattatt
ttcgaggcgttggagaagaacattcaaagtcattggaaccaggctgtccacggccttact
gtcaatgtccggaaaatgttcttggagatggatgtagagctgttcgaagattgtcagagt
caatacgaagaaaaagtatcccgagctaaagacgtagaagagcagcggttgttgacgtgg
aagagactagcagaagtggcgggagaagacatggtaacggcttga
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