Amaranthus tricolor (tampala): 130827406
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Entry
130827406 CDS
T09367
Name
(RefSeq) RNA-binding protein BRN1-like
KO
K13207
CUG-BP- and ETR3-like factor
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130827406
Spliceosome [BR:
atri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130827406
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
Motif
Other DBs
NCBI-GeneID:
130827406
NCBI-ProteinID:
XP_057549106
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All DBs
Position
11:22636233..22644424
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AA seq
430 aa
AA seq
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MAEEQKGERKHSEESVKLFVGQVPKHMTEAQLLAMFKEFTLVDEVNIIKDKVTKASRGCC
FVICPSREEADKAVNACHNKKTLPGALSPLQVKYADGELERLEHKLFVGMLPKNVSETEV
SALFSQYGTIKELQILRGSQQTSKGCAFLKYETKEQALAAMDAVNGKHKMEGSNVPLVVK
WADTEKERHARRAQKAQSRASIEANGDPSQQSSLFGAMPMGYGPAYNGYGYQAPGGYGIM
PYRLPPMQNQYPNMVSPVNQGNGLRGVRPDLSPGAAPRNYVGSGYPAVPNLQYPVPYPGG
MMNHRPVNSSPGSMQPSVANSPSGTSPGASPSSSSVSQVEGPPGANLFIYHIPQEFGDNE
LANAFQPFGRVLSAKVFVDKATGLSKCFGFVSYNSPAAAQSAIGMMNGFQLNGKKLKVQL
KRDNKQNKQY
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagagcaaaaaggagagcggaaacacagcgaggaaagcgtcaaattatttgta
ggtcaagtacctaagcatatgacggaagctcaacttctcgctatgtttaaagagttcact
ttggttgacgaagtcaacattatcaaagataaagttactaaagcttctcgaggatgttgt
tttgtgatttgtccgtctagagaagaagcagacaaagctgtcaatgcttgtcataacaag
aagacgcttcctggagctttgagtcccttgcaagtgaagtatgcagatggcgaactggaa
agattagagcacaagcttttcgttggcatgcttcccaagaatgtctctgaaactgaggtt
tctgctttgttttctcaatatgggacgataaaggagttgcaaattctgagggggtctcag
cagacaagcaaaggatgtgcatttttgaagtatgagacaaaggagcaggctcttgcagca
atggatgctgtcaacggaaagcataaaatggagggctcgaatgttcctttagtagttaag
tgggctgatacagagaaagaaaggcacgctcgaagggctcagaaggcccagtcacgtgct
tcaattgaagcaaatggtgatccatcacagcaatcttctttatttggagccatgccaatg
ggttatggtcctgcatataatggttacggataccaggctcctggcggttacggaattatg
ccttatcgcttgcccccgatgcaaaaccaataccctaatatggtttctccagtaaatcaa
ggaaatggtttacgcggtgtgagacctgatctttctccgggtgctgcaccaagaaactat
gttggatccggttatcctgctgttccaaatcttcaatatcctgtgccatatcccggaggg
atgatgaaccacagaccggttaatagttctccaggatccatgcaacctagtgttgctaac
agtccctctggaacctctcctggtgcaagtccaagttcaagttctgtaagtcaggttgaa
ggaccacctggtgctaatttgtttatataccacatacctcaagaattcggtgataatgaa
ttggcaaacgcttttcagccttttggaagggtcttgagtgccaaggtatttgttgataaa
gcaactggcctcagcaaatgtttcggatttgtcagttacaactcacctgcagctgcacaa
tctgctattggtatgatgaacggttttcaattgaatggtaagaagttgaaggttcagctt
aaaagagataacaaacaaaacaaacagtattag
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