Amaranthus tricolor (tampala): 130827432
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Entry
130827432 CDS
T09367
Name
(RefSeq) amino acid transporter AVT1A
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130827432
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atri02000
]
130827432
Transporters [BR:
atri02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
130827432
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Paralog
GFIT
Motif
Pfam:
Aa_trans
DUF6556
Motif
Other DBs
NCBI-GeneID:
130827432
NCBI-ProteinID:
XP_057549140
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Position
1:43168902..43176151
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AA seq
542 aa
AA seq
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MAGKGKDDTQFSMEDENDLEDHKVDANGVLLSCSGDDNDDDDDDDVDLIDDDDEDKNEMF
VSQNWPQSFRETTDSYTLAASPGFGLLGRTPSMLSMRSKSNLDVDGNRALLLPEYGSRYK
KEEYDKLSKGSSRISNLKSLYEDLGGELPLGQQCTFTQTVFNGLNVMAGVGLLSTPYTIK
EAGWLSLVFLFLFAIVCCYTASLMRHCFESRAGIITYPDIGEAAFGKYGRLFLSIALYVE
LYSYCVEFIILEGDNLSRLFPGADLHWGGFNLDSTHMFALLTVLIVLPTVWLKDLRVISY
LSAGGVISTVLIVFCILLLGTVDGIGFHHTAKVVNWNGIPFAIGVYGFCYSGHAVFPNIY
QSMANKKQFTAALMISFSLCVLIYGSVAVMGYLMFGQGTLSQITLNMPKDSVASNVALWT
TVINPFTKYALLMNPLARGLEELLPPHIANSNWCFFTLRTILVVSTLCVAFLVPFFSLLM
ALIGSLLSILVAVIVPAVSFLKIVDKKATRMQVIVSYAIVVFGVISGIMGTYSSVKSIIE
SY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaaagggaaaggatgatactcaattttcaatggaagatgaaaatgatttagaa
gatcataaagttgatgctaatggggttctccttagttgtagtggtgatgataatgatgat
gatgatgatgatgatgttgatcttattgatgacgacgatgaagataaaaatgaaatgttt
gtttctcaaaattggcctcaaagtttcagagagacgacagactcttatacgcttgctgca
tccccgggatttggattgcttggtcgcactccaagcatgcttagcatgcgcagcaaaagt
aacttagatgttgatggaaatagagctcttttgcttcctgagtatgggagcaggtacaag
aaagaagaatatgacaagttatctaaagggtcatcaaggatatctaatttaaaatcattg
tacgaagatcttggcggagaactaccacttggccaacaatgcacctttactcaaactgta
ttcaatgggttaaacgtgatggccggagtggggcttttatctactccatatactataaaa
gaagctggctggctgagcctcgtattcttattcctctttgcaatagtatgttgttatacg
gcctctcttatgagacattgctttgaaagtagagccgggattataacttaccctgacatt
ggtgaagccgcattcgggaaatatggacgtttatttctatctattgccttgtatgtggag
ctatattcatattgtgtcgaattcattattttggagggagacaatctttctcggctattt
cctggggcggacttacattggggtggttttaacctcgactctacacatatgtttgcattg
ctaaccgtccttattgttctaccaacagtttggttgaaggatctacgagtaatttcttac
ctttcagctggtggagttatttcgacagtgttgattgtgttttgtattctgcttcttgga
acggtggatggaattggctttcatcacacggcaaaagttgtgaactggaatggaattcca
tttgctattggcgtgtatggattctgttattcaggtcatgcagttttcccaaacatctat
cagtcgatggctaacaagaaacagtttacggcagcgctaatgatcagtttttctttgtgt
gttctgatctatggaagtgtcgctgttatgggatatctcatgtttggacaaggcacatta
tctcaaattactctaaacatgccaaaagattccgttgcttctaatgtcgccctctggaca
accgtgatcaacccatttacaaaatatgcgttgctgatgaacccactagctcgaggttta
gaagagttgttgcctccccatatcgcgaacagcaactggtgtttcttcaccctaaggacc
attcttgtcgtttccacactttgtgtagctttccttgttccctttttcagtcttttgatg
gcattgatcggttcacttttgagcatacttgtggctgtaatcgttccagcagtgagtttt
ttaaaaattgtggataagaaggcaacaaggatgcaggtgatagttagctatgcgattgtc
gtgttcggtgttatcagcggaatcatgggcacttattcttcggttaaaagcattatcgag
agttactga
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