Amaranthus tricolor (tampala): 130827460
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Entry
130827460 CDS
T09367
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130827460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130827460
Spliceosome [BR:
atri03041
]
Common components
Common spliceosomal components
SR proteins
130827460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
130827460
NCBI-ProteinID:
XP_057549166
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All DBs
Position
11
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AA seq
299 aa
AA seq
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MISRSRRTLYVGNLPGDIREREVEDLFYKYGRIAHIELKIPPRPPGYAFVEFEEVRDAQD
AIDGRDGYDFDGHRLRVELAHGGRGNSSLTDRYSSHSAGRRGISKHTEFRVLITGLPSSA
SWQDLKDHMRKAGDVCFSQVFSDGGGTTGVVDYTNYDDMKKAIRKLDDSEFRNAFSRAFV
RVKEYKGSRSPPSRSRSRSCSRSRGRSYSSSRSRSKSPKKASRLSPAKPRSRSLSSRSRS
RSRLLSRFEYVQQCGNRKLGSGYVQLYGICKLGSGYVQLYRNCKLGSGYVLLYGNCKLK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgattagccgttccagaagaactctatatgtcggtaatctcccaggggatatcagagag
agggaggttgaagatttgttttacaagtatggacgcattgctcatattgaattgaaaatt
ccgccaagacctccgggttatgcgtttgttgagtttgaggaggtccgtgatgctcaagat
gctattgatggtcgggatggctatgattttgatgggcatcgactaagggttgagcttgct
catggtgggcgtggaaactcttcattgacggaccgctatagtagtcatagtgcaggacgt
cgtggtatatccaaacatactgagtttcgtgtgttgataactggattgccttcttctgct
tcttggcaagacttaaaggatcacatgcgcaaggcaggagatgtttgcttttcccaagtc
ttcagtgatggtggtgggaccacaggggttgttgattatacaaactatgatgacatgaag
aaagctatcaggaagcttgatgactcggaatttcgcaatgcattttctcgggcatttgtt
cgtgtgaaggaatataaaggtagtcgtagtccgccgtcaaggagtaggagcagaagctgc
agccgaagccgtggtcgaagttatagtagtagtagaagtcgaagcaagtctccaaagaag
gcctcacgcctatcacctgctaaaccccgttcccgatctttatcatctcgatctagatca
aggtctcgtttgttgtcaagatttgaatatgtgcagcaatgtgggaatcgcaaattagga
tctggatacgtacagctttatgggatttgcaaattaggatctggatatgtgcagctttat
cggaattgcaaattaggatctggatatgtgctgctttatggaaattgcaaattaaaatga
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