Amaranthus tricolor (tampala): 130827479
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Entry
130827479 CDS
T09367
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130827479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130827479
Spliceosome [BR:
atri03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
130827479
Complex B
130827479
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GFIT
Motif
Pfam:
RRM_1
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
130827479
NCBI-ProteinID:
XP_057549194
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All DBs
Position
11:complement(23239433..23250082)
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AA seq
243 aa
AA seq
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MAEIANPGSDVPPNQTIYINNINEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQA
WVVFEEVSSATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPREKRKRQEEKGN
KKRKEQLDANQTAGGVNYAGAYGVAPPLSQIPYMGVKPVVPEAPAAPNNILFVQNLPHEA
TTLMLSLLFRQYPGFKEVRMVEAKPGIAFVEYENEMHSTVAMNALQNFKMVGDNAMLITY
AKK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaattgctaatccaggaagtgatgttcctcctaaccagactatttatatcaac
aatatcaacgaaaagattaagctcgatgagctgaagaagtcgctaaatgcggtgttttct
caattcgggaagatattagaggtattggcattcaagacattgaaacataaaggtcaagct
tgggttgttttcgaagaggtttcttctgctactaatgcgcttcgtcaaatgcaaggtttt
cctttctacgacaaacctatgagaatacagtatgcgaagaccaagtcagatgtaattgca
aaagcagatggtacttttgttcctcgagaaaaaaggaaaaggcaagaagagaaaggtaat
aagaagcggaaagaacaacttgatgctaatcaaacagctggtggtgtgaattatgctgga
gcttatggcgtagcgcctccactttcacagatcccatatatgggtgtgaaaccagttgtc
ccagaagccccggctgcaccaaataacatactttttgttcaaaatcttccacatgaggca
actaccttgatgctatccctgctgtttagacaataccctggcttcaaggaggtgcgtatg
gtggaagcaaaaccgggcattgcatttgtggagtacgaaaatgaaatgcattcaacggtt
gcaatgaacgctctccagaatttcaaaatggttggagataatgcaatgttaatcacatat
gcaaagaaatag
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