KEGG   Amaranthus tricolor (tampala): 130827512
Entry
130827512         CDS       T09367                                 
Name
(RefSeq) DNA polymerase II subunit B4
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03030  DNA replication
atri03082  ATP-dependent chromatin remodeling
atri03410  Base excision repair
atri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130827512
   03410 Base excision repair
    130827512
   03420 Nucleotide excision repair
    130827512
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    130827512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atri03032]
    130827512
   03036 Chromosome and associated proteins [BR:atri03036]
    130827512
   03400 DNA repair and recombination proteins [BR:atri03400]
    130827512
Enzymes [BR:atri01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     130827512
DNA replication proteins [BR:atri03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    130827512
Chromosome and associated proteins [BR:atri03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    130827512
DNA repair and recombination proteins [BR:atri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      130827512
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone BUD22 Bromo_TP RNA_pol_3_Rpc31 DUF5427 DUF4746 DDHD Zip Nop14
Other DBs
NCBI-GeneID: 130827512
NCBI-ProteinID: XP_057549234
LinkDB
Position
11:19049050..19053694
AA seq 191 aa
MGKETAAAAVTEAEELPKTIVRRVVKDKLSEVSTDGGDVTLHKEALLAFSESARIFIHYL
SATAHDICHESKRQIISADDVLNALEEIEFSEFVVPLRQSLDEFRKKAAGKRAGSAKAKE
ANKKRKTDDETATENSKDDDKVEDENKVEDEVNEEEENDDEDEEDDEAEEEEEEEKDEEQ
AREDKDDSLDN
NT seq 576 nt   +upstreamnt  +downstreamnt
atggggaaggagacggcggctgcggcagtgacggaggcagaggaattaccaaaaacaatc
gtaagacgcgtcgttaaagacaaactttccgaggtttccactgatggcggcgatgtcact
cttcacaaggaagctcttctcgctttttccgaatccgctcgtatcttcatccattatctc
tccgctacggctcatgatatttgtcatgaatcaaaaaggcaaattatcagtgctgatgat
gtgctaaatgctcttgaggaaattgagttttcagagtttgttgtaccactcagacagtcc
cttgatgaatttaggaaaaaggcagccggtaagagggcaggatcagcaaaagcaaaagaa
gcaaacaagaagaggaaaacagatgatgagacagctacagaaaatagtaaagacgacgac
aaagtagaggacgaaaacaaagtagaggatgaagtaaatgaagaggaagagaatgacgat
gaggatgaagaagacgatgaggccgaggaagaagaggaagaggaaaaagatgaggaacaa
gctagggaagacaaggatgattctcttgataattga

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