Amaranthus tricolor (tampala): 130827663
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Entry
130827663 CDS
T09367
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130827663
Membrane trafficking [BR:
atri04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130827663
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
130827663
NCBI-ProteinID:
XP_057549429
LinkDB
All DBs
Position
11:complement(24511836..24538674)
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AA seq
1825 aa
AA seq
DB search
MENSYGHRFRRVTRHSWAANMKLEPLLDKDVEQWPHLNELFQCYRADWVKDENKYGHYES
IGVTAFQNQIYEGADTDIETEMHLSEARQTENEDVTDEELPSTSGRPFGEHLGLSPLPAY
EPAFDWESERSMVFGQRVPETQVQYGSGLKISVKVLSLMFQAGLAEPFYGTICLYNKVKR
EKLSEDFVFQVLPTAMENTGTSNESRAIFYLDAPSASVCLLIQLEKPATEEGGITSSIYS
RKEPSQLSDRERQKLQVWSRIMPYRESFAWAMVPLFDNSIAGTSGGTGSPSSPLAPSVSG
SSFHEGASESTAKITLDGKLGYMSGSSIVVEISNLNKVKESYTEDSLLDPKRKIHKPVRG
MLKLEIEKLHAGNLDFENVSESGSMTNESFDTGGNILDSSQIPNNLDKSQNTKSKQYSTD
GNESVRNGLKAHEHQDSQIDEFHAFDFRAIARNEPFLQLFHCLYVYPLTVSLSRKRNLFI
RIELRKDDTDIRRQPLEATYPREAGASLEKWAHTQVAVGARVGCYHDEIKVSLPPMWTPL
HHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTYAQSRTEISLPIMRELVPHYLQDAGKE
RLDYLEDGKNVFKLRLRLCSSLYPTNERIRDFFLEYDRHILRTSPPWGSELLEAINSLKN
VDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESMDDAERNRFLISY
VDYAFDDFGGRQLPVYSGLSTVWGSLARSKAKGYRVGPVYDDVLAMSWFFLELIVKSMAL
EQIRLFYHSLPSGEDVPPMQLKEGVFRCIIQLYDCLISEVHERCKKGLSLAKRLNSSLAF
FCYDLLSIIEPRQVFELASLYLDKFSGLCQSVLHDCKLTYLQIICDHDLFVEMPGRDPSD
RNYLASVLIQELFLTLDHDDMSLKAKGARILVVLMCKHEFDARYQKPEDKLYIAQLYFPL
ISQILDEMPVFYNLGAAEKREILIVVLQIVRNLDDASLVKAWQQSIARTRLFFKILEECL
ILFEHKKPADSMIIGNSSQTIVADGAASPKYSDRLSPAINNYLSEASRQEPHRTPDNYLW
QRVNSQLSSPSQPYSLREALAQAQSSRIGTSAQALRESLHPILRQKLELWEENLCAAVSL
QVLEVIEKFSTTAASHGIATDYGKLDCITSIFTSFFSRNQPLTFWKALLLVFNNIFSSHG
STLMSRENDRFLKQIAFHLLRLAVYRNENIRRRAVIGLQILVRSSFCNFMQTTRLRVMLT
ITLSELMSDVQATLMKPDGSFEESGEQKRLRKSLEEMADEVNSPSLLRECGLPENALVAI
PENSTENRWSWSEVKSLSDSLTLALDASLEHALLGPVMNIDRYAAAESFYKLAVAFAPVP
DLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVSRNDGVWSKEHVAALRKICPM
VNSEITAEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFCASILELVIPVYKS
RRAYGQLAKCHTMLTSIYESILEQEASPIPFADATYYRVGFYGEKFGKLDKKEYVYREPR
DVRLGDIMEKLSHIYESRMDGNHRLHIIQDSRQVKADELQPGVCYLQITAVDPVMEDEDL
GSRRDRIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRSVLQTEGSFPALVN
RLLVTKSESMEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRILQGSVAV
QVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEEDQEFH
TQLVNGFQSLTAELSHYIPAILSEL
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggagaattcatatgggcatcgatttcgtagagtaactcggcattcatgggctgccaat
atgaaattagaaccacttcttgacaaggatgtggaacagtggccccatctgaatgaactt
ttccaatgctacagagctgattgggttaaagatgaaaacaagtatgggcattatgagagc
attggtgttactgcatttcaaaatcagatatatgaaggagctgacactgatattgaaaca
gagatgcatctttccgaggccagacaaactgaaaacgaagatgttactgatgaagaatta
ccaagcacatccgggaggccatttggagagcatcttgggttgtcgccgttgcctgcttat
gaacctgcatttgactgggagagtgagaggtctatggtatttggtcaaagagttccagaa
actcaagtgcagtatggaagtggcttgaaaatatcagtgaaagttctttctcttatgttt
caagctggactagctgaaccattttatggtacaatttgcttgtataacaaagtgaaaaga
gagaaattatcggaggactttgttttccaggtgcttcctacagcaatggaaaatactggt
acttcaaatgaatcaagagctatattctacttagatgctccctcagcgtcagtttgtttg
ttgatccagttggagaagcctgccactgaagaaggaggcatcacttcctctatctactcg
cgaaaagaaccaagccagctgagtgacagagagaggcagaaattgcaggtctggtctcga
attatgccttacagagagtcatttgcttgggcaatggtaccattatttgataacagcatt
gccggaacctctggtggtactggttctccaagtagccctttggcaccaagtgtctctggt
tctagtttccatgagggtgcatcagagtctactgccaagatcactttagatgggaaactg
ggttatatgagcgggagctcaatcgtcgtcgaaatatcaaatttgaacaaagttaaagaa
agttacacagaggattctcttctggaccctaaaagaaagatccataagcctgttagaggc
atgctgaaattagagattgagaaactccatgccgggaatcttgacttcgaaaatgtttca
gaaagtggcagtatgaccaatgaatcatttgatacggggggtaatatccttgattcttca
cagattccaaataatttggataagtctcagaataccaaatcaaaacaatattctactgat
ggaaacgaatctgtccgaaatgggttaaaagctcatgagcatcaagattcccaaattgat
gaatttcatgcatttgacttccgtgctatcgcgaggaatgagccttttttgcagcttttc
cattgtctatatgtgtatccattgactgttagcttgagtcggaaaaggaatttattcata
cggatagagctccgtaaggatgacacggatattcgccgacaacctctggaggcaacatac
cctagggaggctggtgcatcactagagaagtgggctcacacacaagttgctgttggtgca
agggtgggttgctatcatgacgaaattaaggtctctttacctcctatgtggacgccactg
catcatctattgtttactttctttcatgttgaccttcaaactaaattggaagctccaaaa
ccggtggtgattggctatgcagcacttcccttgtctacatacgctcagtcaagaactgaa
atttcactgcccattatgagagagctagttccgcattatcttcaagatgctgggaaggag
aggctcgactatttagaggatgggaagaatgtcttcaaattgcgactgagattgtgttct
tctctttaccctactaacgaacgtattagggatttctttcttgagtatgataggcacatc
cttcgaacgagccctccatggggatctgagcttcttgaggccattaacagtttgaaaaat
gttgattccactgctttgcttcagtttcttcacccaatattgaatatgcttctccatcta
atcgggaatggtggtgaaacccttcaggttgctgcttttagagctatggttaatatcttg
actcgggttcagcaagaatcaatggatgatgctgaaagaaatcgatttctcattagctat
gttgattatgcatttgatgactttggtggtcgtcaattaccagtttattctggtctttct
accgtgtggggaagcttagcacgtagtaaggcaaaaggttatcgtgtgggaccagtatac
gatgatgttttagcaatgtcttggtttttccttgagctaattgtgaagtcaatggctttg
gaacaaatacgccttttctatcatagccttccatcaggtgaggatgttccacctatgcaa
ttgaaagaaggagttttcaggtgcattatacagctctacgattgtcttatctctgaagtg
catgagcgttgtaaaaaaggcttgagcttagccaagcgtttgaatagtagcttggccttt
ttctgttatgacctactgtctattattgaacctcgccaagtttttgaactggcctccttg
tatctggataaattttctgggctatgccaatctgttcttcatgactgtaagcttacctat
ctacagatcatatgtgatcatgatctttttgtggaaatgcctggacgagacccttcggac
aggaattatcttgcatcagtgctgatacaggaactttttcttacattagatcatgatgat
atgtcactaaaagcgaagggagcaagaatcttggtggttctcatgtgcaaacatgaattt
gatgcccgctaccaaaagcctgaagataaactatatattgcacaactctattttccactg
atcagtcagatacttgacgaaatgcctgtcttttacaaccttggtgctgctgagaagcgt
gagatattgattgttgttctgcaaatcgtacgcaatttagatgatgcatcgcttgtcaag
gcctggcagcaaagcattgcaagaaccagattatttttcaaaattcttgaggaatgctta
atcctttttgagcataaaaaaccagcagacagtatgattattggcaatagttctcaaact
attgtggcggatggagcggcatctccaaagtactcggataggttatctcctgctatcaac
aattatctctccgaggcatctcgacaagagccccatagaacaccagataactatttgtgg
cagagagtgaactctcagttaagctctcctagccaaccatattccttgagagaagcttta
gctcaagctcaatcctccaggataggaacctctgcacaagcactaagagaatcattgcat
ccgatattgagacagaagctggaactgtgggaggagaatttgtgtgctgctgtcagtctt
caggttctagaagttattgaaaaattttctacaactgctgcttcacatggaatagcaaca
gattatggaaaacttgattgtattacttccatattcacaagctttttctcaaggaatcag
ccacttacgttctggaaagctcttttgctggtgtttaacaatatattcagctctcatgga
tcaacactaatgtcacgtgaaaatgatcgctttctcaaacaaattgctttccatctcctt
cgtcttgctgtatatagaaatgaaaacatccggagaagggcggtaattggtcttcagatt
ctcgtaaggagctctttctgtaacttcatgcagacgacaaggcttagagtcatgctgact
attacattgtcagagttgatgtctgatgtccaggctactcttatgaagcctgatggaagt
tttgaggagagtggtgaacagaagcggcttcgtaaatctttggaggaaatggctgatgaa
gtgaacagccccagtttgctgagggagtgtggtcttcccgagaatgctctggttgcgatt
cctgaaaattctacggagaataggtggtcctggtcagaagtcaagtctctctctgacagt
ttgactctggctctcgatgcgagcctggaacatgctctccttggtcctgtcatgaacatt
gatagatatgctgcagcagaaagtttttacaaacttgcagttgcatttgctccagttcct
gatcttcacataatgtggctattgcatctatgtgatgcacatcaagaaatgcagtcctgg
gctgaagcagcacaatgtgctgttgccgttgctggtgttgttatgcaggctctagttagt
agaaatgatggtgtgtggagcaaagagcacgttgctgctttacgtaaaatatgccccatg
gtcaacagtgaaatcacggctgaggcatctgctgccgaggtggaaggctatggtgcttca
aagctaactgtcgattcagctgtaaaataccttcagcttgcaaacaaactgttttctcaa
gctgagctttatcacttctgtgcaagcattctagaattggtgattccggtgtacaaaagc
agaagagcgtatggacaactagccaaatgtcacacaatgctaactagtatatatgaatcc
atccttgaacaagaagcaagtccaattccttttgctgatgctacgtattatagggtaggc
ttttacggcgagaagtttggaaaactggataaaaaagaatatgtatacagagagcctcgt
gatgtacggctgggtgacatcatggaaaagcttagtcatatatatgaatccaggatggac
ggtaatcaccggctgcatattattcaagattcgagacaagtgaaggcagatgagctccag
ccgggtgtctgttatttgcagatcactgctgttgatcccgttatggaagatgaggatctc
ggaagtaggagggataggatattttccctttccactggaagcgtccgagctcgtgttttt
gatcgatttctgttcgacactccttttactaaaaatgggaagactcaaggtggattagag
gatcaatggaaacgacgaagtgttcttcaaacagaaggctcgtttccagctctcgttaac
aggcttctggtgacaaaatctgaatctatggaattctcacctgtagaaaatgctattggg
atgattgaaactcggactgctgctctccgaaatgagcttgaagaacctcgaagctctgaa
ggggaccaattgccacgtctacaaagccttcaaagaatactgcaaggcagtgtcgcagtt
caagtgaatagtggagtgttgagcgtttgtacagcatttctctccggtgagcctgcaaca
agacttcgttcccaagaactccaacaactcattgctgcactactcgaattcatggctgtt
tgtaagagggcaattcgagtacacttcaggctaatcggagaagaagaccaagagtttcat
acgcagcttgtaaatggatttcaatcacttacagccgagttatctcactacattcctgcc
attctttctgagctctaa
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integrated database retrieval system
