Amaranthus tricolor (tampala): 130827734
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Entry
130827734 CDS
T09367
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130827734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130827734
03036 Chromosome and associated proteins [BR:
atri03036
]
130827734
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130827734
Coactivators
SAGA/TFTC/STAGA complex
130827734
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130827734
STAGA complex
130827734
TFTC complex
130827734
SAGA complex
130827734
SLIK complex
130827734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
DUF5814
DUF5740
Motif
Other DBs
NCBI-GeneID:
130827734
NCBI-ProteinID:
XP_057549557
LinkDB
All DBs
Position
11:25780364..25785442
Genome browser
AA seq
428 aa
AA seq
DB search
MENSAIPPSITSSKPSTAPLSTQNSQYQSQQPQTISRSSPISIPNPNFNTTNFPQRPTQS
VKNISRSPFNTQWTQPTSQFSNYPSQFHSSSFAALSAAASSSSRSSAGPAIHGMPNMRRT
GVSSSAPHQTQPFQATSGNFQRHDMLRASTATPSSLSTTSTSQSLLPPSHPWLSSEQRRP
SQSAKPLLNPQSLQQRSYIPQKSVQQLQAAAPPPQKSLPLPQQQQRFPVSNQSQDKQLRP
SSRASQTSANQHVRVQGSANQGSPRPAIGQASIARSEALDSSNAADISKACSTVLGKRNI
KEILNQIDPSEKLHPEAEDALIDIAEDFIDSITSFACSLAKHRKSNMLEAKDILLHIDRD
WNMTLPGFGGDEVRTCKKPVANDIHSARLALTNKSFAGEKTGIKISTGPTTENVKGHLVK
ATTDVVVS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggagaattctgcaattccaccttccattacctcatcaaaaccttctactgcaccactt
tctactcaaaattcacaataccaatcacaacaaccgcaaacaatttcacgttcttcccca
atttcaatcccaaaccctaatttcaataccacaaattttcctcaacgaccaactcaaagt
gtaaaaaacattagtcggtctccttttaatacacaatggactcaacccacttcccaattc
tctaattacccttctcaatttcactcttcttcttttgctgctctttctgctgctgcatcc
tcttcctcccgttcttcggcaggtcctgcaatacatgggatgccgaacatgcgacgtact
ggggtttcttcttctgctcctcatcagacacaaccatttcaggcaacatctgggaatttt
caaagacatgacatgttgagagcttccactgctactccctcaagtttgtcaacaaccagt
acatcacaaagcctactgcctccatctcacccatggttatcttctgaacagaggcgtcca
tctcaatccgccaagcccctgctaaatccccaatcattgcagcaacgatcttatatccct
cagaaatcagtccagcagttgcaagctgctgcaccgccaccacagaaatctttgcctctt
ccacaacaacagcaacgtttcccagtatcaaatcagtcccaagataaacagctgcgtcca
tcatctagagcgtcacaaacttcagcaaaccaacatgtcagggttcagggatcagcaaat
caggggtctccacgccctgcaattgggcaagcaagcattgcccgttcggaagcacttgac
agttcaaatgcggctgatatatctaaagcttgtagcacagtcctcggcaagagaaacatc
aaggaaatcttgaaccagattgatccatcggagaaactacatcctgaagctgaagatgct
ttgatcgatattgctgaagattttattgactcaattacatcatttgcttgttcgttggcg
aagcataggaagtcgaatatgctagaagcaaaagacatactgttgcatatagatcgagat
tggaacatgacgcttcctggatttggtggagatgaagtcaggacttgtaaaaaaccagtt
gctaatgacattcacagtgctcgcctagctctgacaaataaatcttttgccggagaaaag
actggaatcaaaatctctactggaccaactacagaaaatgtgaaagggcatttggttaaa
gcaactaccgatgttgtggtatcttga
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