Amaranthus tricolor (tampala): 130827797
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Entry
130827797 CDS
T09367
Name
(RefSeq) protein transport protein SEC23 E-like
KO
K14006
protein transport protein SEC23
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130827797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130827797
Membrane trafficking [BR:
atri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130827797
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
130827797
NCBI-ProteinID:
XP_057549631
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Position
11:complement(26418370..26427889)
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AA seq
781 aa
AA seq
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MATPEMVGTQPISSDPEGIDGVRMTWNAWPRTKVESSKCVIPIAASISPIHSHPEILTLP
YAPLRCKTCVAALNPFCRVDFTARIWICPFCFQRNHFPPHYSGISETNLPAELYPQYTTL
AYSLSGLNQDPQHQNLPPVYLFVLDTCMIEEELGFVKSALRRAIVSLPDNALVGFISFGT
QVHVHELGFSDMNKVYIFRGSKEISKDQVLDQLGLGPASRRGGPGTVGVGPGYPKPVMQN
GLPGDGVNRFLLPASECEYSLNALLDELQTDQWPVQPGSRALRCTGVALSVAAGLLGACL
PGTGARIIALVGGPCTEGPGTIVSKDLSDPVRSHKDLDKDAAPYFHKAVKFYDNLGKQLV
NQGHVLDLYASALDQVGVAEMKVAVEKTGGLVVLSESFGHSVFKDSFKRLFDVGEQSLGL
CFNGTLEVYCSKDIVIQGVIGPCTSLEKKGVSVSDTVIGQGNTMAWKLCSLDKNTCLTVF
FDISSSERASSPGSQLYLQFLTSYQTPDGQTMLRITTVCRNWFESVVGSEELIRGFDQET
AAVVMARLCSHKMEMEEGFDATRWLDRNLIRLCSKFGEYRKDDPSSFTLNPCFSLLPQFM
FNLRRSQFVQVFNNSPDETAYFRMLLNRENITNAVVMIQPSLISYSFNAPPSPALLDVAS
IAADRILLLDAYFSVVIFHGMTIAQWRNMGYQNQPEHQAFKDLLEAPHQDAQMIIQDRFP
VPRLVVCDQHGSQARFLLAKLNPSATYNNVNEMGAVSDVIFTDDVSLQVFFEHLQRLAVQ
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaccagaaatggtaggaactcaaccaatttcatcagatccagaaggaattgat
ggagttagaatgacatggaatgcttggcctcggacaaaagtcgaatcatcaaagtgtgtt
atcccaattgctgcttcaatttctccgatccattcacacccagaaattttaacactccct
tatgctccccttcgttgtaagacttgtgttgctgccttgaatccattttgtcgggtcgat
ttcactgcaaggatctggatctgccctttttgctttcaacggaatcattttcctccgcat
tattccggtatatcggaaactaatctaccagctgagctctatccacaatacacgacttta
gcttattcgttgtcgggtttgaatcaagacccgcaacatcaaaatttgccgcctgtgtat
ttgttcgttcttgatacttgtatgattgaggaggaattagggtttgtgaaatccgcattg
cgtagagcgattgtttccttacctgataatgcccttgttgggtttatttcatttggtact
caagtgcatgttcatgaattggggttttcggatatgaataaagtctatatatttaggggt
tctaaggagattagtaaagatcaggtgttggatcagcttggattgggccctgcttctcgt
agaggtggacctggtactgttggggttgggcctggataccctaaaccggttatgcaaaat
gggttgccaggtgatggggttaatcggttcttgttgccggcttccgagtgcgagtattca
cttaatgctttattggatgagctacaaacagaccagtggcctgttcaacctggaagtaga
gcattacgatgcactggtgtggcgttaagtgttgctgcagggttgcttggagcatgtttg
cctggaactggtgctcggattatagctttggtgggtggtccttgcacagaagggccagga
acgattgtttctaaagatttgtcagatcctgtacgttcccacaaggatcttgataaagat
gctgcaccctacttccataaagcagtaaaattttatgataatttaggaaaacagcttgtt
aaccagggtcatgttttggacctctatgcgtctgcacttgatcaggttggagtggcagag
atgaaggttgctgtggaaaaaactggtggtcttgttgtgttatcagagagttttggtcac
tcagtgttcaaagactcgttcaagcgtctgtttgatgtaggagaacagtctcttggtttg
tgctttaatggcacgcttgaggtatactgttccaaggatatagtaattcaaggtgttatc
ggaccttgcacatctctagaaaagaaaggagtttctgtatccgatacagtcattggacag
ggaaatactatggcatggaagttgtgtagtcttgacaaaaatacttgtttgactgtcttc
tttgatatatcatctagtgaacgagcaagttctcctggatcacaattgtatcttcagttt
ttgaccagttatcagaccccagatggtcaaacaatgcttcggataacaactgtctgcaga
aactggtttgaaagtgttgttggttcagaggaacttatacgaggctttgatcaagaaact
gctgctgtagtaatggctcgattatgttcccataagatggaaatggaggaaggatttgat
gctacacggtggttggatcgaaacttaatacgcctttgctccaaatttggcgaataccgg
aaagatgacccatcatcatttacattaaatccttgcttttctttattgccccagtttatg
tttaaccttagacggtcacaatttgtgcaggttttcaataatagtcctgatgaaacggcc
tatttccgcatgctgttgaatcgcgagaacattaccaatgcagttgtgatgatccagcca
tctctaatatcatattccttcaatgctccgccatctcctgcattgttagatgtggcatcc
attgccgctgaccgcatacttttgttggatgcgtattttagtgtggttatcttccacgga
atgactattgctcagtggcgcaatatgggctaccagaatcaacctgaacaccaggctttc
aaagatttattagaagctccacatcaggatgctcagatgatcatccaagatcgattcccc
gtccccagattggttgtctgtgatcaacacggttctcaggctagatttctgttggcaaag
ctgaacccatcagcaacatacaacaacgtcaacgaaatgggggctgtttctgacgtaatt
tttacggatgatgttagtctacaagtgttctttgagcatcttcagagattggctgtgcaa
tcttga
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