Amaranthus tricolor (tampala): 130828173
Help
Entry
130828173 CDS
T09367
Name
(RefSeq) ABC transporter E family member 2-like
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atri03009
]
130828173
Ribosome biogenesis [BR:
atri03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
130828173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
Fer4
Fer4_6
AAA_22
AAA_15
AAA
RsgA_GTPase
AAA_29
AAA_23
Rad17
NACHT
AAA_16
Fer4_9
Fer4_2
Fer4_21
TsaE
nSTAND3
Fer4_10
AAA_33
SRP54
AAA_24
AAA_30
AAA_5
Fer4_4
Fer4_16
ORC-CDC6-like
Fer4_7
AAA_19
Fer4_8
Fer4_17
Motif
Other DBs
NCBI-GeneID:
130828173
NCBI-ProteinID:
XP_057549993
LinkDB
All DBs
Position
12:complement(10108554..10116071)
Genome browser
AA seq
605 aa
AA seq
DB search
MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTSASKLAFISEELCIGCGI
CVKKCPFEAIQIINLPKDLDKDTTHRYGANTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
QGNVGQVLEQKDERDMKAELCEDLELNKVLDRNVGDLSGGELQRFAIAVVAIQSAEIYMF
DEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQDNAEDIETYARYKYPTMTKTQG
GFRLRAVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTVEGSDVEIPEFNVSYKPQ
KISPRFPNTVRHLLHQKIRDMYIHPQFVSDVMKPLQIEQLMDQEVVNLSGGELQRVALAL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFIVEHDFIMATYLADRVIV
YEGMPSVDCTANAPQSLLTGMNLFLSHLDITFRRDPTNYRPRINKSESTKDREQKSAGTY
YYLDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcgtttgacacgtattgcaattgtgagctctgatcggtgcaagcctaaaaaa
tgccgtcaggagtgcaagaagagctgtcctgtagttaagaccggcaaactttgtattgag
gtcacttctgcatcaaagcttgcttttatttcagaggaattgtgcattggatgtggtatt
tgtgtcaagaaatgcccttttgaagcaattcaaattattaatcttcctaaagatcttgac
aaggatacaacacaccgttatggtgccaatacctttaaattacataggttacctgtcccg
aggccaggtcaagttcttggcttggtaggaacaaatggtattgggaagtcaactgctcta
aaagttttggctggaaaattgaagcccaatttgggcaggttcaataacccacctgactgg
caggaaattttaacatacttccgcggatctgaattgcaaaactatttcacacgcatattg
gaagataatctgaaggctattatcaagcctcagtatgtggatcatattccaaaggcagta
cagggaaatgttggacaggtccttgagcaaaaagacgagagagatatgaaggctgaactc
tgtgaagatttggagctgaacaaagttctggatcgtaatgttggagatttgtctggtggt
gaactgcagaggtttgcaattgcagtggtggctatacaaagtgctgagatatatatgttt
gatgaaccctcaagttatttggatgtaaaacaaaggcttaaagctgcccaagttattaga
tctttgcttaggccaaatagctatgtcattgtggtggagcacgatcttagtgttttagac
tacctttcagatttcatatgctgcttatatggtaaaccaggtgcatatggggtcgtcact
ctgccgttttctgtaagagaaggaatcaatatattcttggcaggatttgtacccacagag
aatcttcgtttccgggatgaatctcttactttcaaggttgctgagacacctcaagataat
gctgaggatattgagacatatgctcgatacaaataccctaccatgacgaaaactcagggt
ggttttagactgcgtgctgtggaaggtgaatttacagattcacagattattgtgatgttg
ggagaaaatggaacaggaaagacaacttttattcgtatgctggctggtctattgaagcct
gatactgtggagggttctgatgtggaaatacccgaattcaatgtttcttacaagccccaa
aagattagtccaagattcccaaacactgtgaggcacctattacatcagaagataagggat
atgtatattcatccccaatttgtttcagatgttatgaagcctcttcagatagagcagtta
atggatcaagaagttgtgaatttatctggtggagaattgcagagagttgcattagctttg
tgcctgggaaagccggcagatatctacctgatcgatgaacctagtgcatacctggattct
gagcaacgtattgtggcttcaaaggtgataaagagatttattctccatgcaaagaagact
gcatttattgttgaacacgattttattatggcaacatatctagccgacagagtcattgta
tatgaagggatgccatccgtggattgtacggcaaatgcacctcaatcattgttgactgga
atgaatcttttcttatctcatttggatatcacattcagaagagacccaactaattatcgc
ccaaggattaacaagtcagaatccacaaaggacagggagcagaaatctgcaggaacttat
tattacttggatgattga
DBGET
integrated database retrieval system
