Amaranthus tricolor (tampala): 130828291
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Entry
130828291 CDS
T09367
Name
(RefSeq) peroxisome biogenesis protein 12
KO
K13345
peroxin-12
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130828291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130828291
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
130828291
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Zn_ribbon_DnaG
zf-rbx1
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
130828291
NCBI-ProteinID:
XP_057550173
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Position
12:complement(5481771..5491925)
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AA seq
393 aa
AA seq
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MLFQVGGQGTRPTFFEMAAAQQLPSSLRAALTYSLGVMALRRPIIHKVLDYEDEFFAFLM
LVLETHSMRTTDASFSESLYGLRRRTAKIKVKKDSVHSDHTDEIQYSGIEKHQKVLSIVF
LVVLPYFKSKLHSIYSREREAAVRASLWGTDDERLEDADLVDVAESALDQTRASDNELSS
RARILRAAKKFIAACYPWIHAGHEGLAFAYQTLYLLDATGFYSLGLQALGIHVCRATGQE
LMDASSRILRMRSRERERLRGPPWLKKVQGLLLSCMYKVLDYSQTGLIAAVFIFKMMEWW
YQSAEERMSAPTIYPPPPPPPAPKVAKEGIQLPSDKALCPLCSEKRANPSVVTVSGFIFC
YGCIFKYVSQYKRCPVTLISAEVEDIRRLFHDM
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaggtaggagggcagggcacaaggccaacattctttgagatggcggctgct
cagcagcttccttcaagtcttcgtgctgctcttacttactcccttggtgtaatggcttta
agaaggccaatcatacataaagtgttggattatgaggatgaattttttgccttcttaatg
ttagttttggagactcatagcatgagaactacagatgcttctttttcagaatctctatat
ggcttgcgaaggagaacagcaaaaattaaagtgaaaaaagattctgttcattctgaccac
acggatgaaattcagtactctgggatagaaaagcatcaaaaagttctctccattgtcttt
ttggttgtgttaccatattttaagtcaaaattacattcaatatatagcagagagagggaa
gcggctgttcgagcaagcttatggggaacagatgatgaaagattggaggatgccgactta
gtagatgtagcagagagtgcacttgatcaaacacgagcttcagataatgagctttcgtca
agagcgcgcatcttgcgggcagctaaaaaatttatagctgcttgttacccttggatacac
gctgggcatgaaggattagcgtttgcttatcaaacattgtatctgttggatgccactggg
ttttattcacttggattgcaggccttagggatccatgtctgccgagctactggacaggaa
ctgatggatgcttcatcgagaatattaaggatgaggagtcgcgagcgtgagaggcttcgt
ggtcctccttggttaaaaaaagtgcaaggactcttactcagctgtatgtacaaagtgctt
gattattcacagacaggtttaattgcagcagtatttatatttaagatgatggaatggtgg
taccagtcggcagaggagagaatgtcagcaccaactatttatcccccaccaccaccgcct
ccagctccaaaagtggctaaggagggtattcaactgccatcagacaaagcactttgccct
ttatgttcggagaaacgtgccaatccttcagttgttacagtatcaggattcattttctgc
tatggttgcatattcaaatatgtttctcagtataagcggtgcccagtcacactcatctct
gcagaagttgaggacattagacggctcttccacgacatgtaa
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