Amaranthus tricolor (tampala): 130828356
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Entry
130828356 CDS
T09367
Name
(RefSeq) probable CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00061
Fatty acid biosynthesis
atri00071
Fatty acid degradation
atri01100
Metabolic pathways
atri01212
Fatty acid metabolism
atri04146
Peroxisome
Module
atri_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
130828356
00071 Fatty acid degradation
130828356
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130828356
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
atri01004
]
130828356
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130828356
Enzymes [BR:
atri01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
130828356
Lipid biosynthesis proteins [BR:
atri01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
130828356
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of breast milk
130828356
Exosomal proteins of breast cancer cells
130828356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
130828356
NCBI-ProteinID:
XP_057550300
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All DBs
Position
1:complement(7235839..7245765)
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AA seq
658 aa
AA seq
DB search
MAVYTVKVEEARAATESRPSLGAVYRCIYAKNGLTGVPEGIEAPWDLFCKSVEKYPTNRL
LGSRQIIDGKAGPYEWLTFKEVYDSSLQIGSSIRQRGVNPGGHCGIYGSNCPKWIIAMQA
CNSQAISYVPLYDTLGANAVEFIINHAEVSIVFVQEKKIPAILACLSKCTTLKTIVSFEN
ISGAQKNEAEEAGVSCFSWEEFSQLGIKDYELPLKQKTDICTIMYTSGTTGEPKGVILTN
AAFTAEVYAVEYLFSETDKSANSDDVYFSFLPLAHIFDQIVETYCLSKGTSIGFWQGDVK
YLIEDLHELKPTMFCGVPRVYDRIYNGIVDKISSSGSLKKGLFDYAYNYKLRNLEKGLRQ
DEAAPLLDKFFFSKIKQSFGGRVRLLLSGGAPLPRHVEEFFRVTCCCVVVQGYGLTESCG
GCFNSIANAYSMIGTVGIPNTSIEARLESVPEMEYDALSSTPRGELCLRGNTLFSGYHKR
PDLTQEVLIDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLSQGEYIAVENLESIYLRCNLI
TSIWVYGNSFESFLVAVVVPERKAVEDWAANNNQTGDFKTLCGNTKARKYFLDELNSTAQ
KHKLRGFEMLKAVFLEPVPFDIERDLMTPTFKMKRPQLLKHYKEVINEMYSKVKGSKA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttacacggtgaaggtggaggaagcgagggcggcgacggagagtaggccatca
ctaggagctgtttatcgctgcatttacgccaaaaatggcctcactggtgttcctgagggc
atcgaggctccttgggatctcttttgcaaatctgtagaaaaatatccgactaatcgttta
ctgggttctcgtcaaatcattgatggaaaggcgggtccatatgaatggcttactttcaaa
gaggtttatgattcatcacttcaaattggttcatctattagacaacgtggagttaatcct
ggaggtcattgtggaatttatgggtccaactgccccaagtggatcattgctatgcaggct
tgcaatagccaagcaatatcctatgtgccattgtatgacacacttggggccaatgcagtg
gagttcatcattaatcatgctgaagtctccatagttttcgttcaggagaaaaaaatacca
gctatattggcatgcttatcgaagtgtacgaccttaaaaaccattgtcagctttgagaac
atctctggtgcacagaagaatgaagcagaggaagctggcgtgtcttgtttctcttgggaa
gaattctctcaattgggaattaaagattatgagcttcctttgaaacaaaagacagatatc
tgcaccataatgtacacaagtggcacaacaggagagccaaagggggttattcttactaat
gcagcctttacagcagaagtgtatgctgtagaatacctgttttcagagacagacaagtcg
gcaaactcggatgatgtctacttttcatttcttccattggctcatatatttgatcagatt
gtggaaacatattgcctttccaaagggacctcaataggtttctggcaaggggatgtaaag
tatcttattgaggatctccatgaattgaagccaactatgttttgtggggttcccagggtt
tatgaccgaatatataatggtattgtggataaaatttcatccagtggttctctcaagaag
ggcttgtttgactatgcctataactacaaactgcggaatctggagaagggactacgccaa
gatgaagctgcgcctcttttggacaaatttttcttcagtaagatcaaacaaagctttggt
ggtcgagtgcgccttctgttatctggaggagcacctttgccacgtcatgttgaagaattt
tttagagttacttgctgctgtgtggtggtacaggggtacggtctaactgaaagctgtgga
ggatgcttcaattcaatagccaatgcgtattcaatgatagggactgtgggaatccccaat
acttctatagaagcaagacttgaatcagttccagagatggaatatgatgctctttcaagc
acaccacgaggagaactttgtttgagaggaaacaccttgttctctggttatcacaagagg
ccagatctaactcaagaagttcttatagatgggtggttccatacaggtgatattggggag
tggcagcctgatggatctatgaaaatcatagataggaagaaaaacattttcaagttgtct
cagggcgaatatattgcggtcgagaacctcgaaagcatatacttacgctgtaatcttata
acatccatttgggtttatggcaacagcttcgaatcatttcttgtggctgttgttgttcct
gagcgaaaggcagtggaagattgggccgctaataataaccaaacgggtgacttcaaaaca
ctctgcggaaatacaaaagcccgaaaatattttctggatgagctcaatagcactgctcaa
aaacataagcttcgcgggtttgagatgttaaaagcagttttcctcgaacctgttcctttt
gatattgaacgggatttgatgactccaaccttcaaaatgaagaggcctcagttgctcaaa
cactacaaggaagtgatcaacgagatgtatagcaaagtaaagggatcaaaagcgtga
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