Amaranthus tricolor (tampala): 130828396
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Entry
130828396 CDS
T09367
Name
(RefSeq) protein CHROMATIN REMODELING 24
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atri03036
]
130828396
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
130828396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
GCOM2
ResIII
HDA2-3
AAA_34
DUF724
Motif
Other DBs
NCBI-GeneID:
130828396
NCBI-ProteinID:
XP_057550347
LinkDB
All DBs
Position
12:complement(6521364..6532288)
Genome browser
AA seq
1044 aa
AA seq
DB search
MEETTTKLKQPSSLPFESKQLPREDNRLKMKKLVGDAPNFSLFDFDSSPENESDTRDSEV
FDEAIDDNKPNISGIVDAVPHHGKLKPQLKMEKVKIEGRRRLCKLSSKNNDDEYDVHKDK
MKEENHHFFDVSDFSSPSPKKNVGCAENEIRDILNDLSSRLETLTIEKRRNPRPVDLKAV
PLGDNLLQEVIDKGVGQKDDVVDQGKEKKVERGNLSESYRDNLGERAKPNKNTFEEESRN
VNLKAKEKPIVSGKKPVYDIKDDGEDDCVEVGGSNWNQREKLHDSKLGREDGDSSVIEVL
DDDDDANEAVSKDEYAITLSGPRSTYKLPPKVGKMLYPHQRDGLRWLWSLHCQEKGGILG
DDMGLGKTMQVSGFLAGLFDSRLINRAMIVAPKTLIPHWIKELTAVGLSRKIKEYFGTCP
KLRQYELQYVFQNKGILLTTYDIVRFNTKQLCGSGLYDEDCDDGPLWDYMILDEGHLIKN
PSTQRAKSLLAIPCAHRIIISGTPIQNNLKELWALFNFCCPDLLGDNKEFREKYEHPILR
GNDKRASERDKRVGSMVAKELRERIQPYFLRRLKSEVFCNNEFGESPKLSKKNEIIVWLR
LTNCQRKLYEAFLKSEIVLSAFDGSPLAALTILKKICDHPYLLTKRAAEDVLEGMDSMLN
LEERGLAEKLAMHAAHLTENDDIQEKHDNLSCKISFILSLLKNLIPEGHSVLIFSQTRKM
LNLIQESLTMNGFDHLRIDGTTKASDRLKIVEEFQEGRGAPIFLLTSQVGGLGLTLTKAD
RVIVVDPAWNPSMDNQSVDRAYRIGQKKDVIVYRLMTCSTIEEKIYRKQIFKGGLFKTAT
EHKEQTRYFSQQDLTELFSLPKDGFDVSPTQLQLLAEHGDQISMSDFLNVHIKFLESLGI
GGVSHHSLLYSKTEPTSVAQVEEDETRRTGTQIYRRFGSSSTEHYVNGSQYAFCPKDVNL
HKMNSSPQCAAKITESDIKERINRLSQLLSNKDTISRLPDKGEKIRKQIAELNMELENLT
TPEKANQVVELDEITDALQRSLHV
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaccacgacaaagcttaaacagccatcgagtctcccatttgagtccaaacaa
cttcctcgtgaagataatcgattgaagatgaagaaactagtaggcgatgctcctaatttc
tcactctttgattttgattcttctcctgagaacgagagtgatactagagattctgaggtt
ttcgatgaagcaattgatgataataaacctaatatttctggaattgttgatgccgtgcca
catcatgggaagttaaagccgcagctgaagatggagaaagtgaaaattgaaggaaggaga
cggctttgcaaattatcgtcaaaaaataatgatgatgaatatgatgttcataaggataag
atgaaggaagaaaatcatcatttttttgatgtgtctgatttcagttcgccatcacctaag
aagaacgtaggttgtgcggaaaatgagattagggatatattgaatgatttaagttcaagg
cttgagactcttacgattgagaagaggagaaaccctaggccagttgacctaaaggctgtt
cctttgggcgataatttgttgcaggaagtgatagataaaggtgttggtcaaaaggatgat
gtagtggaccagggcaaagagaagaaagttgagcgtgggaatttgagtgaatcttataga
gacaatcttggcgagagagctaaaccgaataagaacacatttgaagaggaatcgagaaat
gtaaatctgaaagcgaaggaaaagcccattgtttctggtaaaaaaccagtttacgatatt
aaagatgatggtgaggatgattgtgttgaggtgggaggtagcaattggaatcagagagaa
aagctgcatgatagtaaattaggcagagaggatggtgattcaagtgtgattgaggtgtta
gatgatgatgatgatgctaatgaggctgtttcaaaggatgaatatgccattactttgagt
ggccctagatcaacttacaagttgcctcctaaagttggcaaaatgttgtatcctcatcaa
cgtgatggcttgaggtggctttggtctcttcactgtcaagagaaaggtgggattttggga
gatgacatgggcttggggaaaaccatgcaggtttctggttttctggctggtttgtttgat
tcgcgtttgataaacagagcaatgattgttgctcctaagacactgatacctcactggatc
aaagaactaactgctgtgggtctttcacggaagataaaagaatattttgggacgtgtcca
aagttacggcagtatgagcttcaatatgtgtttcagaataagggtattcttttgacaact
tatgatattgtacggttcaatacaaaacaactttgcggaagtggtttgtatgatgaagat
tgtgatgacggtcctctctgggactatatgatacttgacgagggtcatctcataaagaat
ccaagtacacaaagagctaagagcttacttgctataccctgtgctcatcgtattatcatt
agtggcacaccaatacaaaataacctaaaggagctgtgggcactcttcaacttctgctgc
cctgatctgttaggcgacaacaaagagttcagagaaaagtatgaacacccaattcttcgt
ggtaatgacaaaagagcctctgaaagggataagcgggtgggttcaatggttgcgaaggag
ttaagggaacgcatccagccttactttctccgacgcttgaaaagtgaagtattttgtaat
aatgagtttggagagagtcctaaattgtccaagaagaatgagataatagtgtggttgcgg
ttgactaactgccagcgcaagttatatgaagcctttctgaagagtgaaatagttctttca
gcttttgatggctctcctcttgctgcattaacgattttgaaaaagatttgtgatcatcca
tatctgttgacaaagagagcagctgaagatgttttggaaggcatggattcgatgcttaat
ctggaagagcgtggcctagctgagaaattggccatgcatgctgcacatctaacagaaaat
gatgatatccaggagaagcatgataatctctcatgcaagatatcgttcatactatctttg
ttgaaaaatttaattccagaggggcatagcgttcttatcttttcacaaactcgcaaaatg
ctcaatctcatccaggaatccttgacgatgaatggttttgaccatttgcgcattgatggc
acaacaaaagctagtgacagattgaagattgtagaagaattccaagaaggtcgtggtgca
cctatttttctattgacctctcaagtcggtggccttgggctaacccttacaaaagctgat
cgtgtaattgttgtagatccagcatggaatcctagtatggataaccaaagtgtagaccgt
gcctatcgaattggtcagaagaaagacgttatagtctaccgattgatgacatgcagtaca
attgaagaaaaaatatatcgaaagcagatattcaagggaggcttgtttaaaacagctaca
gagcacaaagagcaaacacgctatttctctcagcaggaccttacggaacttttcagcctt
cccaaagatggttttgatgtttctcccactcagttgcagttacttgcagagcatggtgat
cagatttcaatgagtgactttttgaatgtgcatatcaaattcctggaatctttaggcatt
ggtggtgtcagtcaccacagtttgctctattccaaaactgaacctacatcagttgcccag
gttgaagaagatgagacaaggagaacaggaacccaaatttatagaagatttggttcttct
tcaacagaacattatgttaatgggtctcaatatgcattttgtccaaaggatgtaaacctc
cacaagatgaattcttccccacaatgtgctgctaaaataactgaatcagatatcaaggag
agaatcaatcgactttctcaactcctatcaaataaggatactatttcaagattgccagac
aaaggggagaaaattcggaagcaaatcgcagaattaaatatggagctcgaaaacttaacc
acacccgagaaggccaaccaggtcgttgaattggatgaaattactgatgcattacagagg
tcattacatgtatag
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