Amaranthus tricolor (tampala): 130828875
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Entry
130828875 CDS
T09367
Name
(RefSeq) phytoene synthase 2, chloroplastic-like isoform X1
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00906
Carotenoid biosynthesis
atri01100
Metabolic pathways
atri01110
Biosynthesis of secondary metabolites
Module
atri_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
130828875
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
atri01006
]
130828875
Enzymes [BR:
atri01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
130828875
Prenyltransferases [BR:
atri01006
]
Terpene biosynthesis
Squalene/phytoene synthase
130828875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Exc
Motif
Other DBs
NCBI-GeneID:
130828875
NCBI-ProteinID:
XP_057550885
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All DBs
Position
12:complement(3696930..3699894)
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AA seq
370 aa
AA seq
DB search
MQILHINCVGTRTTSSHLKKLQVTNNKAELFINNPKSYQVLSKKGVGNYAELHIQQVIEK
QSKGMIPKENTQFDPFILKKAYETCRQICAERSTTYYLGSLLLPEQRKKAVWAVYAWGQL
TDELVDGASANIESSAMLDQWEERLDDIFSGRPHDIADIALADTVQRFSLNIEPFKDVMK
GMRIDTSKTQYETYQELELYCYYVAVTGCLMAVPIFGISLDTDPSSAQTIYQAAFSLGVA
NQLTNILRDVAEDASRGRVYLPQDELTEFGLTNEDIFSRNVSEKWCEFTKMQVERARSYY
VQGEHITSQLNPASRWPVWASLMLYKKILDKIEENNYDNLTKRARVGDVEKLVTLPLAYA
KAMGWCLEKN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcttcacataaattgtgtaggaacaagaacgacgtcgtctcatttgaaaaaa
ttacaggttacaaataataaagctgaattattcataaacaacccaaaaagctaccaagtt
ttatccaaaaaaggtgttggaaattatgcagaattacatattcaacaagtaattgagaaa
cagtctaagggtatgattcccaaagaaaatacccaatttgatccttttattcttaaaaag
gcgtatgaaacgtgtcgacaaatatgtgcagagcggtctacaacgtattatttaggaagt
ttgttattgcctgaacaaagaaagaaagcagtttgggctgtttatgcttggggacaacta
acagacgagctagtcgatggcgcaagcgcaaatatcgaaagctcagctatgttggaccaa
tgggaagagaggcttgacgatatttttagtggacgtccacatgacatcgcagacatagcc
ttggccgacacggtccaaagattttcccttaacattgagcctttcaaagatgtgatgaaa
gggatgagaatagacacatcaaaaactcagtatgaaacttatcaagagcttgaattatac
tgctattatgtagcagtaacaggttgcttaatggcagttcctatatttggaatctccctt
gatactgatccatcttctgctcaaaccatatatcaagctgcattttccttaggagttgct
aatcagctcacaaacatccttagagatgtagcagaagatgcttcaaggggaagagtttat
ctacctcaagacgaactcacagaatttggattaacaaatgaagacatattctcaaggaat
gtaagtgaaaaatggtgtgaattcacaaaaatgcaggtagaaagagcaagatcttattat
gttcaaggggagcatattacttctcaattaaaccctgctagcaggtggccggtgtgggca
tcattgatgttgtacaagaagatcttagacaaaatagaagaaaacaattacgacaacttg
acaaagcgagcaagagtcggagacgttgagaaacttgtaacactacctctagcttatgct
aaagctatgggttggtgtctagaaaaaaattaa
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