Amaranthus tricolor (tampala): 130828902
Help
Entry
130828902 CDS
T09367
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atri01002
]
130828902
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130828902
Enzymes [BR:
atri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130828902
Peptidases and inhibitors [BR:
atri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130828902
Ubiquitin system [BR:
atri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130828902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
Motif
Other DBs
NCBI-GeneID:
130828902
NCBI-ProteinID:
XP_057550920
LinkDB
All DBs
Position
12:12482316..12492068
Genome browser
AA seq
669 aa
AA seq
DB search
MAGLQLSWQPNLPRLKRKNGVPLGLKNLGNSCYLNSVLQCLTYTPPLANFCLNNLHSSSC
DATSAPYKKRDCAFCILEKRIVRSLSIDLALDAPAKIVNCLWIFAEHFKCGRQEDAHEFL
RYVIDACHNTCLRLKKLHPQHVNKVTNGSQGESVSGNSIVKDIFGGSLQSQVKCLSCGTE
SNKIDEIMDISLEISNCSSLKDAMKKFFEAETLDGNNKYKCERCKKLVRAKKQMSIFQAP
NVLVVQLKRFEGAFGGKIDKVIAFEDILVLSSFMCKESQDPHPKYSLFATIVHSGYSPES
GHYYAYIKDALGRWYCCNDSYVTLSTLQKVLSEKAYILFFVRTSQRPVSVTNGVKPHETN
GNSISKSPRISAPVKEMNMKSSNALSLVKGVTVASKSKDASGNLQNKFSGISITVAKKVS
GCDNGITDIQKMEPVAINGKLVHSVSKQMNGNHTHSEEEKNGICRNGEQNEVLRSRVLVN
GDGNLNNGTPHTVEGCTDQHTGLKRRETSGKILKNGITHNGHSNDNIDVTDSKRKSESRE
TAGKRLDNVVTHKSLTDMSISVSGSKRKLKDRDLCILLAKDAESRARVEEFKEVLKKEAS
LNLKKCGWYDDVYKYMRSRKRHCMDACDATDTSGQKQMLIADAKAFISQIPGSLKASLIE
HIRSFSSQN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggccggcttgcaattgagttggcaacctaatcttcctcgccttaaacgcaaaaatggc
gtccctttagggttgaagaatcttggcaattcttgttatcttaattctgttcttcaatgt
cttacttatactcctcctctcgccaatttctgcctcaacaatctccactcttcttcctgt
gatgcgacctctgcgccttataaaaaacgggactgcgctttctgtatattagagaaacga
attgtacgttcactgagtattgatttagcacttgatgcaccagcaaagattgtgaattgt
ctctggatatttgctgagcacttcaagtgtggcaggcaggaggatgcacatgagtttctc
cgttatgttattgatgcctgtcacaatacatgtcttcgtttgaagaaattacatccgcag
catgttaataaagtcactaatggaagccaaggagagagtgttagtggtaatagtattgtg
aaggatatttttgggggttctcttcaaagtcaagtgaaatgcctttcttgtggaactgag
tctaataagatcgatgagatcatggatatttctcttgaaatatccaactgcagttcgctt
aaagatgccatgaaaaagttttttgaggctgaaactctagatggtaataataaatacaaa
tgcgagagatgcaagaaactagtgcgagctaaaaaacaaatgtcgatttttcaagcacca
aatgttcttgtagttcaactgaagagatttgagggagcatttggcgggaagatagataag
gtgattgcatttgaagacattttggtactttcgagcttcatgtgcaaagaaagtcaggat
cctcaccctaagtatagcctgtttgccacaattgtgcattcaggttattcaccggagtct
gggcattattatgcatacattaaggatgccctgggtcgttggtattgctgcaacgattcg
tatgtaacattgtcaacactgcaaaaagttctttcagagaaagcttatattctatttttt
gttcgaactagccagcggcctgtttctgtgacaaatggagtgaagcctcacgaaactaat
ggaaatagcatttctaaatctcctagaatttctgctcctgtgaaagaaatgaatatgaaa
tcatctaatgcactttctcttgttaaaggcgttacagttgcaagtaaaagtaaggatgct
tctggcaatctgcaaaataagttctctggcatctctattactgtggcaaaaaaagtttct
ggttgtgataatgggatcactgatattcagaaaatggaacctgttgcaattaatggaaag
ttggtccactctgtttctaagcagatgaatggaaaccatacacattcagaggaagaaaag
aatggaatttgtaggaatggagaacagaatgaggttttaagaagccgggttttggtaaat
ggtgatggtaatcttaataatgggactcctcatactgttgaaggatgtactgatcagcac
actggtttaaaacgcagagagacttcagggaagatacttaagaatgggatcacccataat
ggtcatagtaatgacaatattgatgttactgattccaaaagaaaatcggaaagcagagag
actgcagggaagaggcttgataatgttgtcactcataaaagtctgactgatatgagtata
agtgtttccggctccaaaagaaagttgaaagatagggacttatgcattttgcttgccaag
gatgctgaatcccgggcaagagttgaagaattcaaagaagttcttaagaaggaggcatcg
ttaaatctgaaaaaatgtggctggtatgatgatgtatataaatacatgagatcaaggaag
aggcactgtatggacgcttgtgacgcaacagataccagcgggcaaaagcaaatgttgatt
gctgatgccaaagcttttatttctcaaattcctggatctctgaaagcgagcctaatagaa
cacattagatcatttagcagccaaaactag
DBGET
integrated database retrieval system
