Amaranthus tricolor (tampala): 130828904
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Entry
130828904 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130828904
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130828904
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
130828904
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRN3
DUF7190
Motif
Other DBs
NCBI-GeneID:
130828904
NCBI-ProteinID:
XP_057550923
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Position
12:10732480..10744469
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AA seq
623 aa
AA seq
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MGVESENNKMDDADFYFTDSDLVSHVREALKSAYSDQSDIYSELVGLLHYNDHLKPDEVA
LLVTSLKALSGAVSFIDSEHHGSLLETIFNMSLWSYGSDVMDALIELIISLAVSSGKYLH
PCLDMLVCNFTPPRKFVEALKLPYGVAKKEKVLVRVHSALVCITGLVPLAPMSLWMIVQQ
RTPKVLQNVQGPVVSMFVENMFMLESGAIGELIGNRVLICAVVDLLIDFDLAIGWDDILE
ENPHKGIFELELEDEQILDDDDGGEFSRESSGHKRLWKDHVYDKLEKLDSLMVLTFEYLK
SCKEKGRLAEVFESLMHSFTITVLSAYKSKFAQFVIFYACALDPEGCGVRFAEILADMFV
CTGFPSITRKSAVAYLGSYMSRGKFLKTSLVVNILGRLVKWCLDYGNLQKEKLDPKAHDV
FYAGCQAVMYVLCFRLKSIIETDLTSQITVPLKKLLMNHLDPLKVCLPSIVEEFLQQANE
THLLHESGVFTFHDMLESEYSKAYGGIERTDIFFPFDPCLLRKSDSFIRPNFVYWSMVQK
TYEEEDASSDEDEDVDVFYPDMDMTASRDEEIAEALNDDLDINDTLTKMSITPKESLLKK
RFDNKSQRPMQMPSKLRPSMSPE
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgggagtagaatcagaaaacaacaagatggatgatgctgatttttattttactgattct
gatttagtttctcatgttcgtgaagctctcaagtccgcttactcggatcaaagtgatata
tacagcgaactcgtaggtttgttgcattacaatgatcatctgaagcctgatgaagtagcc
ctgctagtgacaagcttgaaggctttatctggagcagtttcattcatagacagtgaacac
catgggagtcttctggaaactatctttaatatgagcttgtggagctatggttctgatgtc
atggatgctttgattgaactcattatatccctggctgtttcaagtggtaaatatcttcac
ccatgcttggatatgcttgtatgtaacttcactcctcctaggaaatttgttgaagcgctg
aagttgccatatggcgttgcgaagaaggagaaagtcttggtcagagtgcattctgctttg
gtatgtattacaggcttggtcccactggccccaatgagcttatggatgattgttcaacag
agaacgccaaaagttcttcaaaatgttcaaggacctgtcgtatcgatgtttgtggaaaat
atgttcatgttggaaagcggtgcaattggggaacttattggcaatagagtgctaatctgt
gctgtggtggacctgctgattgattttgacctggcaattggatgggatgatattttagag
gagaaccctcataaaggcatttttgaattggaattagaagatgaacaaatacttgatgat
gatgatggaggtgagttttctagagaatcctctggtcataagcgtttatggaaagatcat
gtatatgacaaattagagaaattggatagccttatggttcttacatttgaatatttaaaa
tcttgcaaagagaaaggccgtttggctgaggtatttgaatcactcatgcattcatttacg
attacagtgttgtctgcttacaagtccaaattcgcacagtttgtgattttctatgcttgt
gctttggatcctgaaggttgtggcgtaagatttgctgaaattcttgctgatatgtttgtt
tgcacgggcttcccctcaattacgaggaagagtgctgttgcttatctaggtagttacatg
tctcgtgggaagttcttaaaaacatctctcgttgtgaatattcttggaagacttgtcaag
tggtgcttagattatggcaatcttcaaaaagagaaattggatccaaaagctcatgatgta
ttttatgccggatgtcaggcagtcatgtatgttctttgtttccgtttgaagtctatcatc
gaaactgatctgacatcgcaaattactgtgcccctgaaaaagcttttgatgaatcacctt
gatccattgaaggtgtgcttgccatctattgtagaagaatttttgcaacaagcaaatgaa
actcatttacttcacgaaagtggagttttcaccttccatgatatgctggagtcagaatat
tccaaagcttatggtggtattgaaaggaccgacatattcttcccatttgacccgtgttta
ttgcggaaaagtgacagtttcattcgcccaaattttgtatattggtctatggttcagaaa
acatatgaggaggaggatgccagcagcgatgaggatgaggatgttgatgttttctaccca
gatatggatatgacagcatcccgggatgaagagattgcagaagccttaaatgatgatctt
gatataaatgatacattaaccaaaatgtctattacacctaaagagtctttacttaaaaag
agatttgataataaatcacaaagacccatgcaaatgccgtcaaaacttagaccctctatg
agccctgaataa
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