Amaranthus tricolor (tampala): 73918768
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Entry
73918768 CDS
T09367
Symbol
rpoB, NQV55_pgp076
Name
(RefSeq) RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
73918768 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
73918768 (rpoB)
03400 DNA repair and recombination proteins [BR:
atri03400
]
73918768 (rpoB)
Enzymes [BR:
atri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
73918768 (rpoB)
Transcription machinery [BR:
atri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
73918768 (rpoB)
DNA repair and recombination proteins [BR:
atri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
73918768 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-GeneID:
73918768
NCBI-ProteinID:
YP_010425958
UniProt:
A0A1S5SHA9
LinkDB
All DBs
Position
CP:
Genome browser
AA seq
1070 aa
AA seq
DB search
MLRDGNEGMSTIPGFNQIQFEGFCRFIDQGLTEELYKFPKMEDTDQEIEFQLFVETYQLA
EPLIKEKDAVYESLTYSSELYVSAGLIWKTSGEMQEQTIWIGNIPLMNSLGTFIVNGIYR
IVINQILQSPGIYYRSELDHNGISVYTGTIISDWGGRSELEIDRKARIWARVSRKQKISI
LILSSAMGSNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFS
ESLCKDLQKKFFQQRCELGRIGRRNMNRRLNLDIPSNNTFLLPRDILAAADHLIGMKFGM
GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTSTP
LTTAFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
ICPIDTSEGINVGLIGSLAIHARIGPWGSLESPYYEISERSKRVQILYLSPSKDEYYMLA
SGNSLALNQGSQEEQVVPARYRQEFLTIAWEQVHLRSIFSFQYFSIGASLIPFIEHNDAN
RALMSSNMQRQAVPLSQSEKCIVGTGLERQAALDSGVLAIAEREGKIIYTTTDKMILSGN
GNTINIPLVMYQRSNKNTCMHQKPRIPRGKCVKKGQILADGAATVGGELALGKNVLVAYM
PWEGYNFEDAVLISERLVYEDIYTSFHIRRYEIQTYVTSQGPEKVTSEIPHLEAHLLRNL
DKNGIVRLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
GRGRVIDVRWIQKKGGSSYNPEMIHVYILQKREIKIGDKVAGRHGNKGIISRILPRQDMP
YLQDGRPVDMIFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLV
FSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGNPYILKLIHQVDDKIHG
RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIKARQEVL
GTTIIGGTITNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRREA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgctacgggatggaaatgaaggaatgtctacaattcctggatttaatcagatacaattt
gaaggattttgtaggttcattgatcagggcttaacagaagaactttataagtttccaaaa
atggaagatacagaccaagaaattgaatttcaattatttgtggaaacatatcaattggca
gaacctttgataaaagaaaaagatgctgtgtatgaatcacttacatattcttctgaatta
tatgtgtccgcgggattaatttggaaaactagcggggagatgcaagaacaaacaatttgg
attggaaatattcctctaatgaattccctgggaacttttatagtaaatggaatatacaga
attgtgatcaatcaaatattgcaaagcccgggtatttattaccgatccgagttggaccat
aacggaatttcggtctataccggcaccataatatcagattggggaggaagatcagaatta
gagattgatcgaaaagcaaggatatgggctcgtgtgagtaggaaacagaaaatatctatt
ttaattctatcatcagctatgggttcgaatttacgagaaattctggataatgtttgctac
ccagaaattttcttgtctttcctgaatgataaagagaaaaaaaaaatagggtcaaaagaa
aatgccattttggagttttatcaacaatttgcttgtgtgggtggggatccagtattttcg
gaatccttatgtaaggacttacaaaaaaaattctttcaacaaagatgcgaattaggaagg
attggtcgacgaaatatgaaccggcgactgaaccttgatataccctcaaacaatacgttt
ttgttaccgcgggatatattggcagctgcggatcatttgatcggaatgaaatttggaatg
ggtacacttgatgatatgaatcatttgaaaaataaacgtattcgttctgtagcagatctc
ttacaagatcaattcggattggctctagttcgtttagaaaatgtggttcgcggaactata
tctggagcaattcggcataaattaataccgactcctcagaatttggtaacttcaactcca
ttaacaacggcttttgaatctttttttggattacacccattatctcaagttttggatcga
actaatccattgacacaaatagttcatgggagaaaattgagttatttgggcccaggggga
ttgacagggcgaactgctagttttcggatacgagatatccatcctagtcactatgggcgt
atttgtccaattgacacgtctgaaggaattaatgttgggcttattggatccttagcaatt
cacgcgaggattgggccttgggggtctctagaaagcccttattatgaaatttctgagaga
tcaaaaagggtacagatcctttatttatcaccaagtaaagacgaatactatatgttagcg
tccggaaattctttggccctgaatcaaggtagtcaggaggagcaggttgttccagcccga
taccgtcaagaattcctgactattgcgtgggaacaagttcatcttcgaagtatcttttcc
ttccaatatttttctattggagcttccctgattccttttatcgagcacaatgatgcaaat
cgagctttaatgagttctaatatgcaacgtcaagcagttccgctttctcagtccgagaag
tgcattgttggaactgggttggaacgccaagcggctctagattcaggagttcttgctata
gccgaacgtgagggaaagattatttatacaactactgacaagatgattttatcaggcaat
ggcaatactataaacattccattagttatgtatcaacgttccaacaaaaatacttgtatg
catcaaaaaccccggattccacggggaaaatgcgttaaaaagggacaaattttagcagat
ggtgccgctacagttggtggtgaactagctttgggaaaaaacgtattagtagcttatatg
ccgtgggaagggtacaattttgaagatgcggtactcattagtgagcgtcttgtgtatgaa
gatatttatacttcttttcacatacggagatatgaaattcagacttatgtgacaagtcaa
ggtcctgaaaaggtcactagcgaaataccacatttagaagctcatttactccgcaattta
gacaaaaatggaattgtgaggctgggatcgtgggtagaaacaggtgatattttagtaggt
aaattaacgcctcagatggcaaaagaatcttcgtatgctccagaagatagattattacga
gctatacttggcattcaggtatccacatcaaaggaaacttgtctaaaactgcctataggg
ggtagggggcgagttattgatgtgagatggatccagaaaaaggggggttctagttataat
ccagaaatgattcatgtatatattttacagaaacgtgaaatcaaaataggtgataaagta
gctggaaggcatggaaataagggtatcatttccagaattttgcctagacaagatatgcct
tatttgcaagatggaagacccgttgatatgatctttaacccattaggagtaccgtcacga
atgaatgtaggacagatatttgaatgttcgctcgggttagcggggagtctgctagataga
cattatcgaatagcaccttttgatgagagatatgaacaagaggcttcgagaaaactagtg
ttttcggaattatatgaagccagtaagcaaacagcgaatccatgggtatttgaacccgag
tatccgggaaagagtcgaatatttgatggaagaacgggagatccttttgaacagcctgtt
ataataggaaatccttatatattgaaattaattcatcaagttgatgataaaatccacggc
cgttctagtggacattatgcacttgttacacaacaaccccttcgaggaagagccaagcaa
ggaggacagagggtaggagaaatggaggtttgggctctagaaggatttggtgttgctcat
attttacaagaaatgcttacttataaatcggatcatattaaagctcgccaagaagtactt
ggtactacgatcattgggggaacaataactaaccccgaagatgctccagaatcttttcga
ctgcttgttcgagaactacgatctttagctctggaactgaatcatttccttgtatctgaa
aaaaacttccagattaataggagggaagcttaa
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